RNA–Protein interactions for RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, human

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-208	ENST00000459850	NXT2	Q9NPJ8	142 aa	Known RBP	10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	RPL31	P62899	125 aa	Known RBP	10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	C11orf87	Q6NUJ2	197 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	OR1L8	Q8NGR8	309 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	AUNIP	Q9H7T9	357 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	SLC25A17	O43808	307 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	HPX	P02790	462 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	CD81	P60033	236 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	KRTCAP3	Q53RY4	240 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	LHX8	Q68G74	356 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	ORAI1	Q96D31	301 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	SOST	Q9BQB4	213 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	HMX2	A2RU54	273 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	ZNF324B	Q6AW86	544 aa	Predicted RBP	10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	KIRREL2	Q6UWL6	708 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	SLC35B3	Q9H1N7	401 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	TBX21	Q9UL17	535 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	SLC23A3	Q6PIS1	610 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	MUC20	Q8N307	709 aa	Predicted RBP	10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	ZFP64	Q9NPA5	681 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	PITPNC1	Q9UKF7	332 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	RAB29	O14966	203 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	GPX1	P07203	203 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	TSPO	P30536	169 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	RGP1	Q92546	391 aa	Predicted RBP	10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	WNT5B	Q9H1J7	359 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	NTM	Q9P121	344 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	PRND	Q9UKY0	176 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	PAM16	Q9Y3D7	125 aa		10.64	□□□□□ -0.71
ABCA2-208	ENST00000459850	CACNA1I	Q9P0X4	2223 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	ITGBL1	O95965	494 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	DLK1	P80370	383 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	ZNF117	Q03924	483 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	CDC20	Q12834	499 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	CXorf1	O96002	111 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	RPS4X	P62701	263 aa	Known RBP	10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	GUCD1	Q96NT3	240 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	hCG_38984	A0A1B0GV85	526 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	EGR1	P18146	543 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	B4GALNT1	Q00973	533 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	SLC25A53	Q5H9E4	307 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	C9orf50	Q5SZB4	431 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	DOCK3	Q8IZD9	2030 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	TRAV1-2	A0A0B4J238	106 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	EPPIN	O95925	133 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	PTHLH	P12272	177 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	IGFBP6	P24592	240 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	ACAA1	P09110	424 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850		Q6ZS52	159 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	RIMKLA	Q8IXN7	391 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	NUDT16L1	Q9BRJ7	211 aa	Known RBP	10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	SDK2	Q58EX2	2172 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	TMEM272	A0A1B0GTI8	110 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	SNURFL	B1AK76	121 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	CLDN34	H7C241	214 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	SMIM18	P0DKX4	95 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	TFF2	Q03403	129 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	ATP5G2	Q06055	141 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	MARVELD3	Q96A59	401 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	GPR82	Q96P67	336 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	FGF20	Q9NP95	211 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	TOMM7	Q9P0U1	55 aa		10.63	□□□□□ -0.71
ABCA2-208	ENST00000459850	OR5AU1	Q8NGC0	362 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	ASB13	Q8WXK3	278 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	GALNT14	Q96FL9	552 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	PAXX	Q9BUH6	204 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	OR2W1	Q9Y3N9	320 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.62	□□□□□ -0.71	6e-7	■■■■■ 39.5
ABCA2-208	ENST00000459850	CLDN20	P56880	219 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	CFAP161	Q6P656	301 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	TP53I13	Q8NBR0	393 aa	Predicted RBP	10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	KCNE3	Q9Y6H6	103 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	PSCA	O43653	123 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	PRDX2	P32119	198 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	CX3CL1	P78423	397 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	PTP4A1	Q93096	173 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	GPR27	Q9NS67	375 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	CXorf51A	A0A1B0GTR3	108 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	PAGE4	O60829	102 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	SH2D5	Q6ZV89	423 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	FMOD	Q06828	376 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	SRSF5	Q13243	272 aa	Known RBP	10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	BSX	Q3C1V8	233 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	C2orf83	Q53S99	150 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	IGHV3OR16-10	A0A075B7F0	116 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	PATE4	P0C8F1	98 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	ZFP36L2	P47974	494 aa	Known RBP	10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	ZNF714	Q96N38	554 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	TBL2	Q9Y4P3	447 aa	Known RBP	10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	CD74	P04233	296 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	CD99	P14209	185 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	RHBDD2	Q6NTF9	364 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	VN1R17P	Q8TDU5	208 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	WNT16	Q9UBV4	365 aa		10.62	□□□□□ -0.71
ABCA2-208	ENST00000459850	LY75	O60449	1722 aa		10.61	□□□□□ -0.71
ABCA2-208	ENST00000459850	PYCARD-AS1	I3L0S3	204 aa		10.61	□□□□□ -0.71
ABCA2-208	ENST00000459850		K7N7A8	449 aa		10.61	□□□□□ -0.71
ABCA2-208	ENST00000459850	PGA4	P0DJD7	388 aa		10.61	□□□□□ -0.71
ABCA2-208	ENST00000459850	PGA5	P0DJD9	388 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms