RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 OR1L1Q8NH94 360 aa13□□□□□ -0.33
CD28-203ENST00000458610 OR2T6Q8NHC8 308 aa13□□□□□ -0.33
CD28-203ENST00000458610 SGMS2Q8NHU3 365 aa13□□□□□ -0.33
CD28-203ENST00000458610 SETD6Q8TBK2 473 aa13□□□□□ -0.33
CD28-203ENST00000458610 CMSS1Q9BQ75 279 aaKnown RBP13□□□□□ -0.33
CD28-203ENST00000458610 PECRQ9BY49 303 aa13□□□□□ -0.33
CD28-203ENST00000458610 IGHV3-43A0A0B4J1X8 118 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 FOXI3A8MTJ6 420 aaPredicted RBP12.99□□□□□ -0.33
CD28-203ENST00000458610 YPEL1O60688 119 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 CD3GP09693 182 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 IGHV3-43DP0DP04 118 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 SDC2P34741 201 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 TMEM50BP56557 158 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 SCAND1P57086 179 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 LY6G6FQ5SQ64 297 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 CROCCP3Q8IVE0 287 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 OR10R2Q8NGX6 335 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 UBALD1Q8TB05 177 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 TAF15Q92804 592 aaKnown RBP eCLIP12.99□□□□□ -0.33
CD28-203ENST00000458610 ARHGAP5-AS1Q96IT6 56 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 YPEL2Q96QA6 119 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 CENPOQ9BU64 300 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 PRSS22Q9GZN4 317 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 C12orf4Q9NQ89 552 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 AK3Q9UIJ7 227 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 DAPK2Q9UIK4 370 aa12.99□□□□□ -0.33
CD28-203ENST00000458610 M0QZK8 103 aa12.98□□□□□ -0.33
CD28-203ENST00000458610 TXNL1O43396 289 aa12.98□□□□□ -0.33
CD28-203ENST00000458610 AIREO43918 545 aa12.98□□□□□ -0.33
CD28-203ENST00000458610 ZNF816Q0VGE8 651 aaPredicted RBP12.98□□□□□ -0.33
CD28-203ENST00000458610 HMGN3Q15651 99 aa12.98□□□□□ -0.33
CD28-203ENST00000458610 MORN2Q502X0 79 aa12.98□□□□□ -0.33
CD28-203ENST00000458610 UTF1Q5T230 341 aa12.98□□□□□ -0.33
CD28-203ENST00000458610 SFXN4Q6P4A7 337 aa12.98□□□□□ -0.33
CD28-203ENST00000458610 ZNF880Q6PDB4 577 aa12.98□□□□□ -0.33
CD28-203ENST00000458610 CCBE1Q6UXH8 406 aaPredicted RBP12.98□□□□□ -0.33
CD28-203ENST00000458610 SLC25A48Q6ZT89 311 aaKnown RBP12.98□□□□□ -0.33
CD28-203ENST00000458610 ATG5Q9H1Y0 275 aa12.98□□□□□ -0.33
CD28-203ENST00000458610 A0A1W2PPE3 182 aa12.97□□□□□ -0.33
CD28-203ENST00000458610 TRIM64CA6NLI5 447 aa12.97□□□□□ -0.33
CD28-203ENST00000458610 SERPINE3A8MV23 424 aa12.97□□□□□ -0.33
CD28-203ENST00000458610 HSD17B6O14756 317 aa12.97□□□□□ -0.33
CD28-203ENST00000458610 CHST1O43916 411 aa12.97□□□□□ -0.33
CD28-203ENST00000458610 SLC2A2P11168 524 aaPredicted RBP12.97□□□□□ -0.33
CD28-203ENST00000458610 MXD1Q05195 221 aa12.97□□□□□ -0.33
CD28-203ENST00000458610 NR2C2APQ86WQ0 139 aa12.97□□□□□ -0.33
CD28-203ENST00000458610 TMEM219Q86XT9 240 aa12.97□□□□□ -0.33
CD28-203ENST00000458610 OR10V1Q8NGI7 309 aa12.97□□□□□ -0.33
CD28-203ENST00000458610 IL1F10Q8WWZ1 152 aa12.97□□□□□ -0.33
CD28-203ENST00000458610 PHF21AQ96BD5 680 aa12.97□□□□□ -0.33
CD28-203ENST00000458610 SMIM30A4D0T7 59 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 RAB27BO00194 218 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 OR2F2O95006 317 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 TALDO1P37837 337 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 EFNB2P52799 333 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 PROK1P58294 105 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 ARSJQ5FYB0 599 aaPredicted RBP12.96□□□□□ -0.33
CD28-203ENST00000458610 CT45A1Q5HYN5 189 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 PLAC9Q5JTB6 97 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 MOB3BQ86TA1 216 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 ZNF439Q8NDP4 499 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 OR52L2PQ8NGH6 319 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 CT45A3Q8NHU0 189 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 WFDC12Q8WWY7 111 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 YIPF6Q96EC8 236 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 RBM14Q96PK6 669 aaKnown RBP12.96□□□□□ -0.33
CD28-203ENST00000458610 GHITMQ9H3K2 345 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 Q9N2K0 584 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 ETV7Q9Y603 341 aa12.96□□□□□ -0.33
CD28-203ENST00000458610 IGHV1-3A0A0C4DH29 117 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 FAM90A9PA6NNJ1 464 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 TRDCB7Z8K6 153 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 TIMM23O14925 209 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 HSPA12AO43301 675 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 PEX14O75381 377 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 HIST1H1DP16402 221 aaKnown RBP12.95□□□□□ -0.34
CD28-203ENST00000458610 ZBTB25P24278 435 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 ZNF137PP52743 207 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 ARFRP1Q13795 201 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 HES1Q14469 280 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 KIR2DS1Q14954 304 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 IDNKQ5T6J7 187 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 TGIF2LXQ8IUE1 241 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 Q8N2B8 174 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 DRAM1Q8N682 238 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 OR2AK2Q8NG84 335 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 OR56B4Q8NH76 319 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 SLC25A33Q9BSK2 321 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 ABHD14AQ9BUJ0 271 aa12.95□□□□□ -0.34
CD28-203ENST00000458610 A0A0B4J203 849 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 A0A1W2PPI3 338 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 LANCL1O43813 399 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 CD24P25063 80 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 CD1BP29016 333 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 PPP1CCP36873 323 aaKnown RBP12.94□□□□□ -0.34
CD28-203ENST00000458610 SERPINB10P48595 397 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 ZNF134P52741 427 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 HLA-DRB3P79483 266 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 PITPNAQ00169 270 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 PLA2G7Q13093 441 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms