RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SPINT2O43291 252 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 HOXA3O43365 443 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-206ENST00000457035 SCGNO76038 276 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 IGHV3-7P01780 117 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 IGHV3-43DP0DP04 118 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 HTR1DP28221 377 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 ZNF134P52741 427 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 PRRX1P54821 245 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 UBA52P62987 128 aaKnown RBP8.13□□□□□ -1.11
ATG4A-206ENST00000457035 HTD2P86397 168 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 ARL6IP1Q15041 203 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 HLA-DRB5Q30154 266 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 PIFOQ8TCI5 191 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 DUX5Q96PT3 197 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 CHMP1AQ9HD42 196 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-206ENST00000457035 RAB9BQ9NP90 201 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 C12orf4Q9NQ89 552 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 DPM3Q9P2X0 92 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 STAB1Q9NY15 2570 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 TRAV18A0A075B6X5 111 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 A0A1W2PPE3 182 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 SDCBPO00560 298 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-206ENST00000457035 TOR1AO14656 332 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 IGHV4-59P01825 116 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 GSTP1P09211 210 aaKnown RBP8.12□□□□□ -1.11
ATG4A-206ENST00000457035 SCTP09683 121 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 CD3GP09693 182 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 ZNF182P17025 639 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-206ENST00000457035 SSX2Q16385 188 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 AANATQ16613 207 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 PNLIPRP3Q17RR3 467 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 TMEM30BQ3MIR4 351 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 Q3ZCU0 254 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 MORN2Q502X0 79 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 HACD4Q5VWC8 232 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 STEAP3Q658P3 488 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 MOB1BQ7L9L4 216 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 PRR18Q8N4B5 295 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 LINC00311Q8N616 119 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 TMEM86BQ8N661 226 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 SAMD12Q8N8I0 201 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 C8orf31Q8N9H6 132 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 ZNF439Q8NDP4 499 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 OR52L2PQ8NGH6 319 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 ZFAND2BQ8WV99 257 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 SSMEM1Q8WWF3 244 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 ACOT12Q8WYK0 555 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 GALMQ96C23 342 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 ISOC1Q96CN7 298 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 S100A16Q96FQ6 103 aaKnown RBP8.12□□□□□ -1.11
ATG4A-206ENST00000457035 CMTM3Q96MX0 182 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 SSX3Q99909 188 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 MMP28Q9H239 520 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 OR2S2Q9NQN1 319 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 DIABLOQ9NR28 239 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 COMMD3Q9UBI1 195 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 MGAT4AQ9UM21 535 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 HILPDAQ9Y5L2 63 aa8.12□□□□□ -1.11
ATG4A-206ENST00000457035 PLXNB1O43157 2135 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 IGKV1-6A0A0C4DH72 117 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 TMEM235A6NFC5 223 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 VGLL3A8MV65 326 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 LEUTXA8MZ59 168 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 TRDCB7Z8K6 153 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 H3BMQ9 156 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 TRIM77I1YAP6 450 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 XRCC3O43542 346 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 YPEL1O60688 119 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 RNASE1P07998 156 aaKnown RBP8.11□□□□□ -1.11
ATG4A-206ENST00000457035 FCGR3AP08637 254 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 ARFRP1Q13795 201 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 SRSF7Q16629 238 aaKnown RBP eCLIP8.11□□□□□ -1.11
ATG4A-206ENST00000457035 CT45A1Q5HYN5 189 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 UBE2NLQ5JXB2 153 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 LY6G6FQ5SQ64 297 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 C16orf87Q6PH81 154 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 Q6ZS49 121 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 SLC25A48Q6ZT89 311 aaKnown RBP8.11□□□□□ -1.11
ATG4A-206ENST00000457035 CT45A3Q8NHU0 189 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 SETD6Q8TBK2 473 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 DYNC2LI1Q8TCX1 351 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 FAM216AQ8WUB2 273 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 EDARADDQ8WWZ3 215 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 CREB3L1Q96BA8 519 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 YPEL2Q96QA6 119 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 CHIAQ9BZP6 476 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 RBM38Q9H0Z9 239 aaKnown RBP8.11□□□□□ -1.11
ATG4A-206ENST00000457035 DPAGT1Q9H3H5 408 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 AUNIPQ9H7T9 357 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 GNG12Q9UBI6 72 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 ZNF230Q9UIE0 474 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-206ENST00000457035 POMT1Q9Y6A1 747 aa8.11□□□□□ -1.11
ATG4A-206ENST00000457035 IGKV1D-8A0A087WSZ0 117 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 SLC31A2O15432 143 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 SSX5O60225 188 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 HPGDSO60760 199 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 APOA1P02647 267 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 EIF4EP06730 217 aaKnown RBP8.1□□□□□ -1.11
ATG4A-206ENST00000457035 GSTT2P0CG29 244 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 GSTT2BP0CG30 244 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms