RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 UBE2QL1A1L167 161 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 PSMB11A5LHX3 300 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 CRHBPP24387 322 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 CHATP28329 748 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 REG1BP48304 166 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 BEAN1Q3B7T3 259 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 NKAPLQ5M9Q1 402 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 TGIF2LXQ8IUE1 241 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 OR8H1Q8NGG4 311 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 SGCDQ92629 289 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 TM2D1Q9BX74 207 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 CCDC90BQ9GZT6 254 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 OR2S2Q9NQN1 319 aa14.18□□□□□ -0.14
MSH6-207ENST00000456246 SH2D7A6NKC9 451 aaPredicted RBP14.17□□□□□ -0.14
MSH6-207ENST00000456246 G3V4G9 280 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 RGS11O94810 467 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 HSMCR30P0CW71 290 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 CPEP16870 476 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 VHLP40337 213 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 HTD2P86397 168 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 HNF4GQ14541 408 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 TCTEX1D4Q5JR98 221 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 LY6G6FQ5SQ64 297 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 IZUMO2Q6UXV1 221 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 REC114Q7Z4M0 266 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 FOXRED2Q8IWF2 684 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 COMMD1Q8N668 190 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 OR1L1Q8NH94 360 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 MRPL30Q8TCC3 161 aaKnown RBP14.17□□□□□ -0.14
MSH6-207ENST00000456246 TMEM203Q969S6 136 aa14.17□□□□□ -0.14
MSH6-207ENST00000456246 EAF1Q96JC9 268 aaPredicted RBP14.17□□□□□ -0.14
MSH6-207ENST00000456246 URM1Q9BTM9 101 aaKnown RBP14.17□□□□□ -0.14
MSH6-207ENST00000456246 LIN7CQ9NUP9 197 aaKnown RBP14.17□□□□□ -0.14
MSH6-207ENST00000456246 A0A1W2PRX2 142 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 NCBP2LA6PVI3 153 aaKnown RBP14.16□□□□□ -0.14
MSH6-207ENST00000456246 TMEM14DPA8MWL7 114 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 LANCL1O43813 399 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 MOSP00540 346 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 IGHG2P01859 326 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 SLC35B1P78383 322 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 MORN2Q502X0 79 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 CT45A1Q5HYN5 189 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 MOB1BQ7L9L4 216 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 OR2W3Q7Z3T1 314 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 SLC35E3Q7Z769 313 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 Q8N6K4 173 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 OR10V1Q8NGI7 309 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 CT45A3Q8NHU0 189 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 GALMQ96C23 342 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 ABRACLQ9P1F3 81 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 TGP01266 2768 aa14.16□□□□□ -0.14
MSH6-207ENST00000456246 IGHV3-72A0A0B4J1Y9 119 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 SERPINE3A8MV23 424 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 SLC17A2O00624 439 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 SLC31A2O15432 143 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 YPEL1O60688 119 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 PF4P02776 101 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 CD33P20138 364 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 SLC6A1P30531 599 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 PSMD7P51665 324 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 UNC119Q13432 240 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 TBCEQ15813 527 aaPredicted RBP14.15□□□□□ -0.14
MSH6-207ENST00000456246 KHDC1LQ5JSQ8 128 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 OR10K2Q6IF99 312 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 WFDC9Q8NEX5 89 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 YPEL2Q96QA6 119 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 MGLLQ99685 303 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 SULT4A1Q9BR01 284 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 ABHD14AQ9BUJ0 271 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 GON7Q9BXV9 100 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 RIMS4Q9H426 269 aaPredicted RBP14.15□□□□□ -0.14
MSH6-207ENST00000456246 PLGRKTQ9HBL7 147 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 ACOT13Q9NPJ3 140 aa14.15□□□□□ -0.14
MSH6-207ENST00000456246 AP4M1O00189 453 aa14.14□□□□□ -0.15
MSH6-207ENST00000456246 ARSBP15848 533 aa14.14□□□□□ -0.15
MSH6-207ENST00000456246 BLVRBP30043 206 aaPredicted RBP14.14□□□□□ -0.15
MSH6-207ENST00000456246 ZNF134P52741 427 aa14.14□□□□□ -0.15
MSH6-207ENST00000456246 RPS25P62851 125 aaKnown RBP14.14□□□□□ -0.15
MSH6-207ENST00000456246 QRFPP83859 136 aa14.14□□□□□ -0.15
MSH6-207ENST00000456246 HMGN3Q15651 99 aa14.14□□□□□ -0.15
MSH6-207ENST00000456246 FAM53AQ6NSI3 398 aaPredicted RBP14.14□□□□□ -0.15
MSH6-207ENST00000456246 TMEM91Q6ZNR0 172 aa14.14□□□□□ -0.15
MSH6-207ENST00000456246 ZNF367Q7RTV3 350 aa14.14□□□□□ -0.15
MSH6-207ENST00000456246 C6orf201Q7Z4U5 140 aa14.14□□□□□ -0.15
MSH6-207ENST00000456246 OR51D1Q8NGF3 324 aa14.14□□□□□ -0.15
MSH6-207ENST00000456246 ABCG5Q9H222 651 aa14.14□□□□□ -0.15
MSH6-207ENST00000456246 PLEKHJ1Q9NW61 149 aa14.14□□□□□ -0.15
MSH6-207ENST00000456246 ERICH4A6NGS2 130 aa14.13□□□□□ -0.15
MSH6-207ENST00000456246 NAPSAO96009 420 aa14.13□□□□□ -0.15
MSH6-207ENST00000456246 RAB11BQ15907 218 aa14.13□□□□□ -0.15
MSH6-207ENST00000456246 SVOPQ8N4V2 548 aa14.13□□□□□ -0.15
MSH6-207ENST00000456246 Q8N9W7 124 aa14.13□□□□□ -0.15
MSH6-207ENST00000456246 CNBD2Q96M20 576 aa14.13□□□□□ -0.15
MSH6-207ENST00000456246 RASL11BQ9BPW5 248 aa14.13□□□□□ -0.15
MSH6-207ENST00000456246 FAAP24Q9BTP7 215 aa14.13□□□□□ -0.15
MSH6-207ENST00000456246 CHMP1AQ9HD42 196 aaPredicted RBP14.13□□□□□ -0.15
MSH6-207ENST00000456246 ZFP57Q9NU63 452 aa14.13□□□□□ -0.15
MSH6-207ENST00000456246 STEAP1Q9UHE8 339 aa14.13□□□□□ -0.15
MSH6-207ENST00000456246 RAB26Q9ULW5 256 aa14.13□□□□□ -0.15
MSH6-207ENST00000456246 MGAT4AQ9UM21 535 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms