RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 FAM89BQ8N5H3 189 aa11.59□□□□□ -0.55
HSPG2-207ENST00000453796 CT45A3Q8NHU0 189 aa11.59□□□□□ -0.55
HSPG2-207ENST00000453796 NEDD4LQ96PU5 975 aa11.59□□□□□ -0.55
HSPG2-207ENST00000453796 FAAP24Q9BTP7 215 aa11.59□□□□□ -0.55
HSPG2-207ENST00000453796 NDUFB11Q9NX14 153 aa11.59□□□□□ -0.55
HSPG2-207ENST00000453796 MOB4Q9Y3A3 225 aa11.59□□□□□ -0.55
HSPG2-207ENST00000453796 SHISA3A0PJX4 238 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 SH2D7A6NKC9 451 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-207ENST00000453796 M0QZK8 103 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 CCRL2O00421 344 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 SOCS1O15524 211 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 NAPSAO96009 420 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 LPLP06858 475 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 ARSBP15848 533 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 BLVRBP30043 206 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-207ENST00000453796 REG1BP48304 166 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 HMGN3Q15651 99 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 MORN2Q502X0 79 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 ZNF880Q6PDB4 577 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 IZUMO1Q8IYV9 350 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 OR10V1Q8NGI7 309 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 FAM110DQ8TAY7 271 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-207ENST00000453796 RTN4IP1Q8WWV3 396 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-207ENST00000453796 PLGRKTQ9HBL7 147 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 GNG12Q9UBI6 72 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 V9GY05 133 aa11.58□□□□□ -0.56
HSPG2-207ENST00000453796 TRAV1-2A0A0B4J238 106 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 LDLRAD4O15165 306 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 WIPF1O43516 503 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 IGKV1D-33P01593 117 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 IGKV1-33P01594 117 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 TMEM11P17152 192 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 TMEM50BP56557 158 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 HTD2P86397 168 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 GNMTQ14749 295 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 RAB11BQ15907 218 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 ARSJQ5FYB0 599 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-207ENST00000453796 LY6G6FQ5SQ64 297 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 UBE2UQ5VVX9 321 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 STEAP3Q658P3 488 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 SPARTQ8N0X7 666 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 Q8N6K4 173 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 C5orf56Q8N8D9 126 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 OR51D1Q8NGF3 324 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 CITED2Q99967 270 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-207ENST00000453796 YTHDF1Q9BYJ9 559 aaKnown RBP11.57□□□□□ -0.56
HSPG2-207ENST00000453796 JPT1Q9UK76 154 aa11.57□□□□□ -0.56
HSPG2-207ENST00000453796 TRBV6-6A0A0A6YYG2 114 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 IGHV3-72A0A0B4J1Y9 119 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 TRDV1A0A1B0GX56 115 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 FGF16O43320 207 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 KCNAB3O43448 404 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 YPEL1O60688 119 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 GALP22466 123 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 IL3RAP26951 378 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 CD1BP29016 333 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 CLDN12P56749 244 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 CD83Q01151 205 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 HES1Q14469 280 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 TCTEX1D4Q5JR98 221 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 MOB3BQ86TA1 216 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 NDUFA11Q86Y39 141 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 ODF3L1Q8IXM7 274 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 LYG1Q8N1E2 194 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 SVOPQ8N4V2 548 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 OR52L2PQ8NGH6 319 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 FAM3DQ96BQ1 224 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 EAF1Q96JC9 268 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-207ENST00000453796 YPEL2Q96QA6 119 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 URM1Q9BTM9 101 aaKnown RBP11.56□□□□□ -0.56
HSPG2-207ENST00000453796 Q9H521 79 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 OR2S2Q9NQN1 319 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 PLEKHJ1Q9NW61 149 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 KCNIP1Q9NZI2 227 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 HSF4Q9ULV5 492 aa11.56□□□□□ -0.56
HSPG2-207ENST00000453796 TXNL1O43396 289 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 PEX14O75381 377 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 OPN1MWP04001 364 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 OPN1MW2P0DN77 364 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 OPN1MW3P0DN78 364 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 PPP1CCP36873 323 aaKnown RBP11.55□□□□□ -0.56
HSPG2-207ENST00000453796 PSMD7P51665 324 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 OR10A3P58181 314 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 PLA2G7Q13093 441 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 HNF4GQ14541 408 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 C2orf76Q3KRA6 126 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 OR5AU1Q8NGC0 362 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 STEAP1Q9UHE8 339 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 AK3Q9UIJ7 227 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 LRRC42Q9Y546 428 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 NOTCH1P46531 2555 aa11.55□□□□□ -0.56
HSPG2-207ENST00000453796 TMEM272A0A1B0GTI8 110 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 ZNF736B4DX44 427 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-207ENST00000453796 LANCL1O43813 399 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 VEGFCP49767 419 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 DEFA6Q01524 100 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 NSUN5P1Q3KNT7 163 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 HES5Q5TA89 166 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 C10orf99Q6UWK7 81 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 CENPVQ7Z7K6 275 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms