RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 OR6C6A6NF89 314 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 CA11O75493 328 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 PGLYRP1O75594 196 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 RPL36A-HNRNPH2H7BZ11 118 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 GDF9O60383 454 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 CTXN2P0C2S0 81 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 RAC2P15153 192 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 MEF2BQ02080 365 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 GUSBP11Q6P575 273 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 FSCN3Q9NQT6 498 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 FAM27BQ5VT28 67 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 RABEPKQ7Z6M1 372 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 ZDHHC23Q8IYP9 409 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 OR2V1Q8NHB1 315 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 TBX15Q96SF7 602 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 FER1L5A0AVI2 2057 aa11.91□□□□□ -0.5
UBE2D3-210ENST00000453744 EDDM3BP56851 147 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 DOCK10Q96BY6 2186 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 EREGO14944 169 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 JOSD1Q15040 202 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 ABHD3Q8WU67 409 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 FAM131CQ96AQ9 280 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 ACTR3CQ9C0K3 210 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 GRIFINA4D1Z8 144 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 GYPAP02724 150 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 OR10P1Q8NGE3 313 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 GATAD1Q8WUU5 269 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 PINX1Q96BK5 328 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 SCRT1Q9BWW7 348 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 CTDSP1Q9GZU7 261 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 PARLQ9H300 379 aa11.9□□□□□ -0.5
UBE2D3-210ENST00000453744 TRAV34A0A0B4J273 112 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 SYNGR1O43759 233 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 KITLGP21583 273 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 CLDN15P56746 228 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 PPP1CBP62140 327 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 FOXO1Q12778 655 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 IGFBP7Q16270 282 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 DBX2Q6ZNG2 339 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 NOL4LQ96MY1 436 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 NDUFAF3Q9BU61 184 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 CISD1Q9NZ45 108 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 CLN8Q9UBY8 286 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 GZMBP10144 247 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 WNT5AP41221 380 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 KRTDAPP60985 99 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 SPCS3P61009 180 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 HIST1H3AP68431 136 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 ZNF90Q03938 601 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 PDLIM3Q53GG5 364 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 C10orf35Q96D05 121 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 GCM1Q9NP62 436 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 IFNL4K9M1U5 179 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 GRPP07492 148 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 OR4A8P0C604 315 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 UCP3P55916 312 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 RAB30Q15771 203 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 ACOT6Q3I5F7 207 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 FAM90A2PQ658T7 463 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 LRTM2Q8N967 370 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 OR2H1Q9GZK4 316 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 TMEM38BQ9NVV0 291 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 CLEC1BQ9P126 229 aa11.89□□□□□ -0.51
UBE2D3-210ENST00000453744 COX5AP20674 150 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 PLA2G5P39877 138 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 DSCR4P56555 118 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 MSMO1Q15800 293 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 SYT13Q7L8C5 426 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 OR1A1Q9P1Q5 309 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 TIMM8BQ9Y5J9 83 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 A0A0G2JRQ6 117 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 CD81P60033 236 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 CCL7P80098 99 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 HTD2P86397 168 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 SRXN1Q9BYN0 137 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 SERTAD4Q9NUC0 356 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 ROS1P08922 2347 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 C11orf94C9JXX5 98 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 NXPH2O95156 264 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 CEACAM6P40199 344 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 CNN1P51911 297 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 ID3Q02535 119 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 DPPA3Q6W0C5 159 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 BTF3L4Q96K17 158 aa11.88□□□□□ -0.51
UBE2D3-210ENST00000453744 A0A1B0GUS0 222 aa11.87□□□□□ -0.51
UBE2D3-210ENST00000453744 SLC25A6P12236 298 aa11.87□□□□□ -0.51
UBE2D3-210ENST00000453744 FKBP2P26885 142 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-210ENST00000453744 NXPH1P58417 271 aa11.87□□□□□ -0.51
UBE2D3-210ENST00000453744 FGFBP3Q8TAT2 258 aa11.87□□□□□ -0.51
UBE2D3-210ENST00000453744 NEIL1Q96FI4 390 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-210ENST00000453744 C12orf49Q9H741 205 aa11.87□□□□□ -0.51
UBE2D3-210ENST00000453744 OR2W1Q9Y3N9 320 aa11.87□□□□□ -0.51
UBE2D3-210ENST00000453744 CA6P23280 308 aa11.87□□□□□ -0.51
UBE2D3-210ENST00000453744 THBS3P49746 956 aa11.87□□□□□ -0.51
UBE2D3-210ENST00000453744 RSPO1Q2MKA7 263 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-210ENST00000453744 NFAM1Q8NET5 270 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms