RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 ARHGDIBP52566 201 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 RIPPLY3P57055 190 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 GNG2P59768 71 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 PLA2G7Q13093 441 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 AANATQ16613 207 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 MOGAT2Q3SYC2 334 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 CDNFQ49AH0 187 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 TMEM69Q5SWH9 247 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 PRAMEF5Q5TYX0 476 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 BAIAP2L2Q6UXY1 529 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 IL17RELQ6ZVW7 336 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 OR9G1Q8NH87 305 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 FAM216AQ8WUB2 273 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 CCDC107Q8WV48 283 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 DYRK2Q92630 601 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 GALMQ96C23 342 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 DGCR14Q96DF8 476 aaKnown RBP7.1□□□□□ -1.27
COL28A1-205ENST00000453441 GHITMQ9H3K2 345 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 PRDM13Q9H4Q3 707 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 TAF9BQ9HBM6 251 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 Q9N2K0 584 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 COMMD3Q9UBI1 195 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 FAM96BQ9Y3D0 163 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 MXRA5Q9NR99 2828 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 TRAV18A0A075B6X5 111 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 ODF3BA8MYP8 253 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 OOSP1A8MZH6 123 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 TRDCB7Z8K6 153 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 SDCBPO00560 298 aaPredicted RBP7.09□□□□□ -1.27
COL28A1-205ENST00000453441 ITGB1BP1O14713 200 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 HBZP02008 142 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 ARG1P05089 322 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 FCGR3AP08637 254 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 CTXN2P0C2S0 81 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 RCC1P18754 421 aaPredicted RBP7.09□□□□□ -1.27
COL28A1-205ENST00000453441 COX7A1P24310 79 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 IL3RAP26951 378 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 HTR1DP28221 377 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 HLA-DRB3P79483 266 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 ZNF260Q3ZCT1 412 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 HCP5Q6MZN7 132 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 ZNF782Q6ZMW2 699 aaPredicted RBP7.09□□□□□ -1.27
COL28A1-205ENST00000453441 ABHD12Q8N2K0 398 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 PNKDQ8N490 385 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 LINC00311Q8N616 119 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 TMEM86BQ8N661 226 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 OR4A4PQ8NGN8 299 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 SETD6Q8TBK2 473 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 MALSU1Q96EH3 234 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 MMP27Q9H306 513 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 AUNIPQ9H7T9 357 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 SCPEP1Q9HB40 452 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 ZNF286AQ9HBT8 521 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 BATF3Q9NR55 127 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 GFOD1Q9NXC2 390 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 GNG12Q9UBI6 72 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 ZNF69Q9UC07 566 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 KCNK7Q9Y2U2 307 aa7.09□□□□□ -1.27
COL28A1-205ENST00000453441 MEIOCA2RUB1 952 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 LEUTXA8MZ59 168 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 CLDN34H7C241 214 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 SULT1C2O00338 296 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 RGS5O15539 181 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 TCF21O43680 179 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 YPEL1O60688 119 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 IGLV1-47P01700 117 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 LPLP06858 475 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 ZBTB25P24278 435 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 NFYBP25208 207 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 SAA4P35542 130 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 LOXL3P58215 753 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 TAS2R20P59543 309 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 MRPS10P82664 201 aaKnown RBP7.08□□□□□ -1.28
COL28A1-205ENST00000453441 HLA-DRB5Q30154 266 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 CCDC144NLQ6NUI1 221 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 BRD3OSQ6XYD6 125 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 LDLRAD3Q86YD5 345 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 OR5R1Q8NH85 324 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 MCFD2Q8NI22 146 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 RFESDQ8TAC1 157 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 ZFAND2BQ8WV99 257 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 YPEL2Q96QA6 119 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 SLIRPQ9GZT3 109 aaKnown RBP7.08□□□□□ -1.28
COL28A1-205ENST00000453441 NXF2Q9GZY0 626 aaKnown RBP7.08□□□□□ -1.28
COL28A1-205ENST00000453441 MMP28Q9H239 520 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 DPAGT1Q9H3H5 408 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 OR2S2Q9NQN1 319 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 DPM3Q9P2X0 92 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 POMT1Q9Y6A1 747 aa7.08□□□□□ -1.28
COL28A1-205ENST00000453441 TRAV39A0A0B4J263 110 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 MEX3AA1L020 520 aaKnown RBP7.07□□□□□ -1.28
COL28A1-205ENST00000453441 BTBD17A6NE02 478 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 TMEM235A6NFC5 223 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 VGLL3A8MV65 326 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 FAM25AB3EWG3 89 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 FAM25CB3EWG5 89 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 FAM25GB3EWG6 89 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 H3BS24 57 aa7.07□□□□□ -1.28
COL28A1-205ENST00000453441 J3QR06 171 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms