RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 FAM90A14PP0C7W9 464 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A24PP0C7X0 464 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 HSMCR30P0CW71 290 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 FUT3P21217 361 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 IL3RAP26951 378 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 LOXL3P58215 753 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 ZNF816Q0VGE8 651 aaPredicted RBP6.87□□□□□ -1.31
RFX3-209ENST00000451859 GNMTQ14749 295 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 C6orf141Q5SZD1 244 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 LIPKQ5VXJ0 399 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 SIGIRRQ6IA17 410 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 SLC16A12Q6ZSM3 486 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 CEACAM19Q7Z692 300 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 SLC35E3Q7Z769 313 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 THNSL2Q86YJ6 484 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 TGIF2LXQ8IUE1 241 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 OR52M1Q8NGK5 317 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 SETD6Q8TBK2 473 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 NRG4Q8WWG1 115 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 TMEM203Q969S6 136 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 PHF21AQ96BD5 680 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 MRPS24Q96EL2 167 aaKnown RBP6.87□□□□□ -1.31
RFX3-209ENST00000451859 EAF1Q96JC9 268 aaPredicted RBP6.87□□□□□ -1.31
RFX3-209ENST00000451859 Q96M66 194 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 CCDC90BQ9GZT6 254 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 CST11Q9H112 138 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 TAF9BQ9HBM6 251 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 OR2S2Q9NQN1 319 aa6.87□□□□□ -1.31
RFX3-209ENST00000451859 ERICH4A6NGS2 130 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 LINC01548A6NM66 108 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 NUDT19A8MXV4 375 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 H0YHG0 523 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 PDCD6O75340 191 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 MYF6P23409 242 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 P2RY14Q15391 338 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 SPHARQ15513 63 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 HSD17B12Q53GQ0 312 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 C18orf65Q6ZTR6 163 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 LRRTM1Q86UE6 522 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 LYPD6Q86Y78 171 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 FOXRED2Q8IWF2 684 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 CDH26Q8IXH8 852 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 MS4A15Q8N5U1 240 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 LINC00311Q8N616 119 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 ZNF439Q8NDP4 499 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 OR52L2PQ8NGH6 319 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 OR2T10Q8NGZ9 312 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 MRPL30Q8TCC3 161 aaKnown RBP6.86□□□□□ -1.31
RFX3-209ENST00000451859 MRAPQ8TCY5 172 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 RTN4IP1Q8WWV3 396 aaPredicted RBP6.86□□□□□ -1.31
RFX3-209ENST00000451859 THRSPQ92748 146 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 UFD1Q92890 307 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 SULT4A1Q9BR01 284 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 UQCC2Q9BRT2 126 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 NICN1Q9BSH3 213 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 RAB9BQ9NP90 201 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 NECAP2Q9NVZ3 263 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 KCNIP1Q9NZI2 227 aa6.86□□□□□ -1.31
RFX3-209ENST00000451859 LSM2Q9Y333 95 aaKnown RBP6.86□□□□□ -1.31
RFX3-209ENST00000451859 FGF16O43320 207 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 SC5DO75845 299 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 CD1AP06126 327 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 SLC2A2P11168 524 aaPredicted RBP6.85□□□□□ -1.31
RFX3-209ENST00000451859 HTR2CP28335 458 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 PPP1CCP36873 323 aaKnown RBP6.85□□□□□ -1.31
RFX3-209ENST00000451859 ZNF134P52741 427 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 RAB25P57735 213 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 RPS25P62851 125 aaKnown RBP6.85□□□□□ -1.31
RFX3-209ENST00000451859 SLC35B1P78383 322 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 CT45A1Q5HYN5 189 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 KPRPQ5T749 579 aaPredicted RBP6.85□□□□□ -1.31
RFX3-209ENST00000451859 FOXB2Q5VYV0 432 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 GLT8D1Q68CQ7 371 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 TRAT1Q6PIZ9 186 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 SLC25A48Q6ZT89 311 aaKnown RBP6.85□□□□□ -1.31
RFX3-209ENST00000451859 C6orf201Q7Z4U5 140 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 IZUMO1Q8IYV9 350 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 KLHL30-AS1Q8NEE0 82 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 CT45A3Q8NHU0 189 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 IL1F10Q8WWZ1 152 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 DUX3Q96PT4 197 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 NEDD4LQ96PU5 975 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 FAAP24Q9BTP7 215 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 TMEM59Q9BXS4 323 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 PLGRKTQ9HBL7 147 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 CHMP1AQ9HD42 196 aaPredicted RBP6.85□□□□□ -1.31
RFX3-209ENST00000451859 AURKAIP1Q9NWT8 199 aaPredicted RBP6.85□□□□□ -1.31
RFX3-209ENST00000451859 TPRKBQ9Y3C4 175 aa6.85□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A10PA6NDY2 464 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A7PA6NKC0 464 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 FAM90A23PA8MXZ1 464 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 RGS10O43665 173 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 CA11O75493 328 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 MOSP00540 346 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 IGHG2P01859 326 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 UBBP0CG47 229 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 SRMP19623 302 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 CHATP28329 748 aa6.84□□□□□ -1.31
RFX3-209ENST00000451859 BLVRBP30043 206 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms