RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CBX3Q13185 183 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 ZNF260Q3ZCT1 412 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 RNASE12Q5GAN4 147 aaKnown RBP13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 KIR3DL3Q8N743 410 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 OR4S1Q8NGB4 309 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 DEDD2Q8WXF8 326 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 FAAP24Q9BTP7 215 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 CHST6Q9GZX3 395 aa13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 RIMS4Q9H426 269 aaPredicted RBP13.93□□□□□ -0.18
PRPF40A-204ENST00000450303 MFNGO00587 321 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 CRYBA1P05813 215 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 GNB3P16520 340 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 GDNFP39905 211 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 OR3A1P47881 315 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 GNG2P59768 71 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 TATDN3Q17R31 274 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 ZFP69Q49AA0 526 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 PLAC9Q5JTB6 97 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 SLC35E4Q6ICL7 350 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 BRICD5Q6PL45 260 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 C17orf107Q6ZR85 190 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 IZUMO1Q8IYV9 350 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 FAM185AQ8N0U4 392 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 CMSS1Q9BQ75 279 aaKnown RBP13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 SULT4A1Q9BR01 284 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 AUNIPQ9H7T9 357 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 CHMP1AQ9HD42 196 aaPredicted RBP13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 TAS2R8Q9NYW2 309 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 FAM96BQ9Y3D0 163 aa13.92□□□□□ -0.18
PRPF40A-204ENST00000450303 TMEM30CPA0ZSE6 113 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 LANCL1O43813 399 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 ERP29P30040 261 aaKnown RBP13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 PRSS3P35030 304 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 RAG2P55895 527 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 EDDM3BP56851 147 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 ATXN7L3Q14CW9 347 aaPredicted RBP13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 PLA1AQ53H76 456 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 KRBOX4Q5JUW0 171 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 SHISA2Q6UWI4 295 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 SGMS2Q8NHU3 365 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 SSMEM1Q8WWF3 244 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 TNFRSF14Q92956 283 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 DMRTB1Q96MA1 342 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 C19orf12Q9NSK7 152 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 ING3Q9NXR8 418 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 C1RLQ9NZP8 487 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 ZNF581Q9P0T4 197 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 ALG5Q9Y673 324 aa13.91□□□□□ -0.18
PRPF40A-204ENST00000450303 POM121CA8CG34 1229 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 NPFFO15130 113 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 IER3P46695 156 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 RELBQ01201 579 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 PAX5Q02548 391 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 CD300CQ08708 224 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 KLF9Q13886 244 aaPredicted RBP13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 EDDM3AQ14507 147 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 TMEM86BQ8N661 226 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 OR6F1Q8NGZ6 308 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 NCOR1P1Q9H4R4 102 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 AK3Q9UIJ7 227 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 POMT1Q9Y6A1 747 aa13.9□□□□□ -0.18
PRPF40A-204ENST00000450303 TMEM235A6NFC5 223 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 M0R1W7 72 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 SULT1C2O00338 296 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 RBBP9O75884 186 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 CBX5P45973 191 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 P2RX3P56373 397 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 GUCA2AQ02747 115 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 SSBP1Q04837 148 aaKnown RBP13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 MEF2CQ06413 473 aaPredicted RBP13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 AESQ08117 197 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 ZNF497Q6ZNH5 498 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 SCPEP1Q9HB40 452 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 C12orf4Q9NQ89 552 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 OR6C3Q9NZP0 311 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 TRAPPC2LQ9UL33 140 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 MGAT4AQ9UM21 535 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 KCNK7Q9Y2U2 307 aa13.89□□□□□ -0.19
PRPF40A-204ENST00000450303 MEIKINA0A087WXM9 373 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 TRBV23-1A0A0A0MS06 115 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 A0A1W2PPH5 198 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 hADV38S2A0JD32 116 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 GPR137BO60478 399 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 TCRBP04435 133 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 H2AFB2P0C5Z0 115 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 ERVFRD-1P60508 538 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 RRAS2P62070 204 aaPredicted RBP13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 SRSF4Q08170 494 aaKnown RBP13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 C1orf122Q6ZSJ8 110 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 LDLRAD3Q86YD5 345 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 ZNF565Q8N9K5 539 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 OR52I2Q8NH67 350 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 OR56B4Q8NH76 319 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 PLPPR1Q8TBJ4 325 aa13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 METTL8Q9H825 291 aaKnown RBP13.88□□□□□ -0.19
PRPF40A-204ENST00000450303 TRGV10A0A0A0MS01 117 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 MEX3AA1L020 520 aaKnown RBP13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 PRAF2O60831 178 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 MT-ND4P03905 459 aa13.87□□□□□ -0.19
PRPF40A-204ENST00000450303 FBP1P09467 338 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms