RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 RNF114Q9Y508 228 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 A0A0B4J203 849 aa11.71□□□□□ -0.53
USP39-206ENST00000448971 M0QZ24 198 aa11.71□□□□□ -0.53
USP39-206ENST00000448971 MXD1Q05195 221 aa11.71□□□□□ -0.53
USP39-206ENST00000448971 TIMM50Q3ZCQ8 353 aa11.71□□□□□ -0.53
USP39-206ENST00000448971 SLC16A12Q6ZSM3 486 aa11.71□□□□□ -0.53
USP39-206ENST00000448971 MOB1BQ7L9L4 216 aa11.71□□□□□ -0.53
USP39-206ENST00000448971 LINC01006Q8NI28 216 aa11.71□□□□□ -0.53
USP39-206ENST00000448971 PIFOQ8TCI5 191 aa11.71□□□□□ -0.53
USP39-206ENST00000448971 CAPSLQ8WWF8 208 aa11.71□□□□□ -0.53
USP39-206ENST00000448971 MBNL3Q9NUK0 354 aaKnown RBP11.71□□□□□ -0.53
USP39-206ENST00000448971 ABRACLQ9P1F3 81 aa11.71□□□□□ -0.53
USP39-206ENST00000448971 FBLN5Q9UBX5 448 aa11.71□□□□□ -0.53
USP39-206ENST00000448971 A6NDX4 124 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 NOTOA8MTQ0 251 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 OOSP1A8MZH6 123 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 HSD17B6O14756 317 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 TIMM23O14925 209 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 LDLRAD4O15165 306 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 SLC2A2P11168 524 aaPredicted RBP11.7□□□□□ -0.54
USP39-206ENST00000448971 CD24P25063 80 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 IL3RAP26951 378 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 MRPS15P82914 257 aaKnown RBP11.7□□□□□ -0.54
USP39-206ENST00000448971 PLA2G7Q13093 441 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 Q6ZTK2 550 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 ZNF554Q86TJ5 538 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 TPRA1Q86W33 373 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 NR2C2APQ86WQ0 139 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 ARHGAP5-AS1Q96IT6 56 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 RANBP3Q9H6Z4 567 aaPredicted RBP11.7□□□□□ -0.54
USP39-206ENST00000448971 C12orf4Q9NQ89 552 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 OR2S2Q9NQN1 319 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 AK3Q9UIJ7 227 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 DAPK2Q9UIK4 370 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 JPT1Q9UK76 154 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 RAB22AQ9UL26 194 aa11.7□□□□□ -0.54
USP39-206ENST00000448971 KIAA2026Q5HYC2 2103 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 NOTCH3Q9UM47 2321 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 TSPAN9O75954 239 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 RAB7AP51149 207 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 EFNB2P52799 333 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 LOXL3P58215 753 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 HMGN3Q15651 99 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 ARSJQ5FYB0 599 aaPredicted RBP11.69□□□□□ -0.54
USP39-206ENST00000448971 FAM53AQ6NSI3 398 aaPredicted RBP11.69□□□□□ -0.54
USP39-206ENST00000448971 SFXN4Q6P4A7 337 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 CCBE1Q6UXH8 406 aaPredicted RBP11.69□□□□□ -0.54
USP39-206ENST00000448971 FAM89BQ8N5H3 189 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 OR56B4Q8NH76 319 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 OR2T6Q8NHC8 308 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 IL1F10Q8WWZ1 152 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 AKR1E2Q96JD6 320 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 HDHD3Q9BSH5 251 aaPredicted RBP11.69□□□□□ -0.54
USP39-206ENST00000448971 PECRQ9BY49 303 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 RIMS4Q9H426 269 aaPredicted RBP11.69□□□□□ -0.54
USP39-206ENST00000448971 C16orf95Q9H693 158 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 RNF167Q9H6Y7 350 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 HSF4Q9ULV5 492 aa11.69□□□□□ -0.54
USP39-206ENST00000448971 A0A075B6Q4 140 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 METTL21EPA6NDL7 271 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 FOXI3A8MTJ6 420 aaPredicted RBP11.68□□□□□ -0.54
USP39-206ENST00000448971 LY6LH3BQJ8 138 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 NAPSAO96009 420 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 LPLP06858 475 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 RAB6AP20340 208 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 SDC2P34741 201 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 REG1BP48304 166 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 HES1Q14469 280 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 GNMTQ14749 295 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 Q3ZCU0 254 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 OR52L2PQ8NGH6 319 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 GALMQ96C23 342 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 RAB3CQ96E17 227 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 CMSS1Q9BQ75 279 aaKnown RBP11.68□□□□□ -0.54
USP39-206ENST00000448971 CENPOQ9BU64 300 aa11.68□□□□□ -0.54
USP39-206ENST00000448971 NBEAL2Q6ZNJ1 2754 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 A0A1W2PPI3 338 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 SLC31A2O15432 143 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 AIREO43918 545 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 RGS11O94810 467 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 SNRNP70P08621 437 aaKnown RBP11.67□□□□□ -0.54
USP39-206ENST00000448971 CD3GP09693 182 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 CLEC2LP0C7M8 214 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 PPP1CCP36873 323 aaKnown RBP11.67□□□□□ -0.54
USP39-206ENST00000448971 TMEM50BP56557 158 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 PROK1P58294 105 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 HLA-DRB3P79483 266 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 DIAPH2-AS1Q14236 149 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 MOGAT2Q3SYC2 334 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 SLC25A48Q6ZT89 311 aaKnown RBP11.67□□□□□ -0.54
USP39-206ENST00000448971 C16orf82Q7Z2V1 217 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 OR8H3Q8N146 312 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 LINC00311Q8N616 119 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 DRAM1Q8N682 238 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 C8orf31Q8N9H6 132 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 DTX3Q8N9I9 347 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 OR10R2Q8NGX6 335 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 LGALS14Q8TCE9 139 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 SLC25A33Q9BSK2 321 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 ABHD14AQ9BUJ0 271 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms