RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 OGG1O15527 345 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 GPX5O75715 221 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 LIMS3P0CW19 117 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 LIMS4P0CW20 117 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 SLC2A2P11168 524 aaPredicted RBP10.36□□□□□ -0.75
HMGB3-204ENST00000448905 FUT3P21217 361 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 RAB9AP51151 201 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 MORN2Q502X0 79 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 GLIPR1L1Q6UWM5 242 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 ZNF554Q86TJ5 538 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 CDH26Q8IXH8 852 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 JAGN1Q8N5M9 183 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 ZNF555Q8NEP9 628 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 MUC7Q8TAX7 377 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 RGP1Q92546 391 aaPredicted RBP10.36□□□□□ -0.75
HMGB3-204ENST00000448905 GHSRQ92847 366 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 OR51J1Q9H342 316 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 ZMAT4Q9H898 229 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 TAF9BQ9HBM6 251 aa10.36□□□□□ -0.75
HMGB3-204ENST00000448905 FAM90A10PA6NDY2 464 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 FAM90A7PA6NKC0 464 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 FAM90A23PA8MXZ1 464 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 I3L521 148 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 OVOL1O14753 267 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 SLC31A2O15432 143 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 MYF6P23409 242 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 CD40LGP29965 261 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 PPIFP30405 207 aaKnown RBP10.35□□□□□ -0.75
HMGB3-204ENST00000448905 VHLP40337 213 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 ACTBP60709 375 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 TMEM267Q0VDI3 215 aaPredicted RBP10.35□□□□□ -0.75
HMGB3-204ENST00000448905 LSAMPQ13449 338 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 Q499Y3 187 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 YIF1BQ5BJH7 314 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 FAM53AQ6NSI3 398 aaPredicted RBP10.35□□□□□ -0.75
HMGB3-204ENST00000448905 ZNF439Q8NDP4 499 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 OR1L1Q8NH94 360 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 GALMQ96C23 342 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 SMIM19Q96E16 107 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 OR5B12Q96R08 314 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 CST11Q9H112 138 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 KLK15Q9H2R5 256 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 PARP11Q9NR21 331 aa10.35□□□□□ -0.75
HMGB3-204ENST00000448905 RCC2Q9P258 522 aaKnown RBP10.35□□□□□ -0.75
HMGB3-204ENST00000448905 MRPS28Q9Y2Q9 187 aaKnown RBP10.35□□□□□ -0.75
HMGB3-204ENST00000448905 NBR2O15453 112 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 SAP30O75446 220 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 IGLV1-40P01703 118 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 HLA-DRB1P01911 266 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 LYL1P12980 280 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 IGFBP3P17936 291 aaPredicted RBP10.34□□□□□ -0.75
HMGB3-204ENST00000448905 RCC1P18754 421 aaPredicted RBP10.34□□□□□ -0.75
HMGB3-204ENST00000448905 ETV1P50549 477 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 HTD2P86397 168 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 MYOZ3Q8TDC0 251 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 DCUN1D4Q92564 292 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 MUL1Q969V5 352 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 ABHD14AQ9BUJ0 271 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 SELENOIQ9C0D9 397 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 PALMDQ9NP74 551 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 ABRACLQ9P1F3 81 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 JPT1Q9UK76 154 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 RNF150Q9ULK6 438 aa10.34□□□□□ -0.75
HMGB3-204ENST00000448905 EXOSC1Q9Y3B2 195 aaKnown RBP10.34□□□□□ -0.75
HMGB3-204ENST00000448905 A0A1W2PP11 408 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 UBE2QL1A1L167 161 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 G3V318 75 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 H3BNX3 289 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 ARPC1BO15143 372 aaKnown RBP10.33□□□□□ -0.76
HMGB3-204ENST00000448905 YPEL1O60688 119 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 CRTAPO75718 401 aaPredicted RBP10.33□□□□□ -0.76
HMGB3-204ENST00000448905 CAPGP40121 348 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 GABPB1Q06547 395 aaPredicted RBP10.33□□□□□ -0.76
HMGB3-204ENST00000448905 KIAA0141Q14154 515 aaPredicted RBP10.33□□□□□ -0.76
HMGB3-204ENST00000448905 C5orf64Q2M2E5 130 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 OR2G6Q5TZ20 316 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 ZNF660Q6AZW8 331 aaPredicted RBP10.33□□□□□ -0.76
HMGB3-204ENST00000448905 AWAT2Q6E213 333 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 XAF1Q6GPH4 301 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 SBSPONQ8IVN8 264 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 GAPTQ8N292 157 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 TCTEX1D1Q8N7M0 179 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 MINDY2Q8NBR6 621 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 OR6Q1Q8NGQ2 317 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 RCHY1Q96PM5 261 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 YPEL2Q96QA6 119 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 OR4C12Q96R67 309 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 ANKRD60Q9BZ19 345 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 GNB4Q9HAV0 340 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 GHRLQ9UBU3 117 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 STEAP1Q9UHE8 339 aa10.33□□□□□ -0.76
HMGB3-204ENST00000448905 TRBV5-5A0A0J9YX44 114 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 LINC01619G3V211 115 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 ATP6V0E1O15342 81 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 SC5DO75845 299 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 MGMTP16455 207 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 MC5RP33032 325 aa10.32□□□□□ -0.76
HMGB3-204ENST00000448905 ADARB1P78563 741 aaKnown RBP10.32□□□□□ -0.76
HMGB3-204ENST00000448905 DOC2BQ14184 412 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms