RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ABCA2Q9BZC7 2435 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 FLNBO75369 2602 aaKnown RBP16.05■□□□□ 0.16
SGCE-207ENST00000447873 hCG_1809904A0A1W2PP81 198 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 A0A1W2PPE2 198 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 A0A1W2PR64 198 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 A0A1W2PRV1 198 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 C17orf98A8MV24 154 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 NFYBP25208 207 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 DLX6P56179 175 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 TMEM30BQ3MIR4 351 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 ZNF660Q6AZW8 331 aaPredicted RBP16.05■□□□□ 0.16
SGCE-207ENST00000447873 OR10V1Q8NGI7 309 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 DMRTB1Q96MA1 342 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 RDH8Q9NYR8 311 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 JPT1Q9UK76 154 aa16.05■□□□□ 0.16
SGCE-207ENST00000447873 IGHV2-70DA0A0C4DH43 119 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 MMP23AO75900 390 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 LOXL3P58215 753 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 ERVFRD-1P60508 538 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 GNMTQ14749 295 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 H1FOOQ8IZA3 346 aaPredicted RBP16.04■□□□□ 0.16
SGCE-207ENST00000447873 WFDC11Q8NEX6 87 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 TERB2Q8NHR7 220 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 MMP26Q9NRE1 261 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 GFOD1Q9NXC2 390 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 POLR3KQ9Y2Y1 108 aaPredicted RBP16.04■□□□□ 0.16
SGCE-207ENST00000447873 WNK2Q9Y3S1 2297 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 AADACP22760 399 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 PPP1CCP36873 323 aaKnown RBP16.04■□□□□ 0.16
SGCE-207ENST00000447873 HERV-K104P61576 105 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 ARF6P62330 175 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 PAX2Q02962 417 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 FAM53AQ6NSI3 398 aaPredicted RBP16.04■□□□□ 0.16
SGCE-207ENST00000447873 C11orf42Q8N5U0 333 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 OR52M1Q8NGK5 317 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 COPZ2Q9P299 210 aa16.04■□□□□ 0.16
SGCE-207ENST00000447873 FAM172BPA6NC97 362 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 B4DSR2 109 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 RGS11O94810 467 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 PPYP01298 95 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 RBP4P02753 201 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 IGHV1-8P0DP01 117 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 FXYD4P59646 89 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 RBMS2Q15434 407 aaKnown RBP16.03■□□□□ 0.16
SGCE-207ENST00000447873 PLA1AQ53H76 456 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 BTNL3Q6UXE8 466 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 GLCCI1Q86VQ1 547 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 LHFPL1Q86WI0 220 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 MAPK1IP1LQ8NDC0 245 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 DACT3Q96B18 629 aaPredicted RBP16.03■□□□□ 0.16
SGCE-207ENST00000447873 OR2W1Q9Y3N9 320 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 NOTCH2Q04721 2471 aa16.03■□□□□ 0.16
SGCE-207ENST00000447873 OR5H14A6NHG9 310 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 M0R1W7 72 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 YPEL1O60688 119 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 TUSC2O75896 110 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 TRIM16LQ309B1 348 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 MORN2Q502X0 79 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 AADACL3Q5VUY0 350 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 KIR3DL3Q8N743 410 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 DUSP18Q8NEJ0 188 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 OR13C8Q8NGS7 320 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 YPEL2Q96QA6 119 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 SLC25A21Q9BQT8 299 aaPredicted RBP16.02■□□□□ 0.16
SGCE-207ENST00000447873 TOLLIPQ9H0E2 274 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 OCEL1Q9H607 264 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 ITPR3Q14573 2671 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 CR1P17927 2039 aa16.02■□□□□ 0.16
SGCE-207ENST00000447873 IGHV3-7P01780 117 aa16.01■□□□□ 0.15
SGCE-207ENST00000447873 TCRBP04435 133 aa16.01■□□□□ 0.15
SGCE-207ENST00000447873 MSMBP08118 114 aa16.01■□□□□ 0.15
SGCE-207ENST00000447873 EDARADDQ8WWZ3 215 aa16.01■□□□□ 0.15
SGCE-207ENST00000447873 TOMM40LQ969M1 308 aa16.01■□□□□ 0.15
SGCE-207ENST00000447873 MOB3AQ96BX8 217 aa16.01■□□□□ 0.15
SGCE-207ENST00000447873 C1orf159Q96HA4 380 aa16.01■□□□□ 0.15
SGCE-207ENST00000447873 SUCNR1Q9BXA5 334 aa16.01■□□□□ 0.15
SGCE-207ENST00000447873 PARP12Q9H0J9 701 aaKnown RBP16.01■□□□□ 0.15
SGCE-207ENST00000447873 ITGB1BP2Q9UKP3 347 aa16.01■□□□□ 0.15
SGCE-207ENST00000447873 RBM7Q9Y580 266 aaKnown RBP16.01■□□□□ 0.15
SGCE-207ENST00000447873 SESN1Q9Y6P5 492 aa16.01■□□□□ 0.15
SGCE-207ENST00000447873 NDUFB6O95139 128 aa16■□□□□ 0.15
SGCE-207ENST00000447873 ECI1P42126 302 aa16■□□□□ 0.15
SGCE-207ENST00000447873 DVL1P1P54792 670 aaPredicted RBP16■□□□□ 0.15
SGCE-207ENST00000447873 OXA1LQ15070 435 aa16■□□□□ 0.15
SGCE-207ENST00000447873 METTL11BQ5VVY1 283 aa16■□□□□ 0.15
SGCE-207ENST00000447873 PLET1Q6UQ28 207 aa16■□□□□ 0.15
SGCE-207ENST00000447873 CCBE1Q6UXH8 406 aaPredicted RBP16■□□□□ 0.15
SGCE-207ENST00000447873 C1orf122Q6ZSJ8 110 aa16■□□□□ 0.15
SGCE-207ENST00000447873 LINC01356Q8N9X3 169 aa16■□□□□ 0.15
SGCE-207ENST00000447873 OR2AK2Q8NG84 335 aa16■□□□□ 0.15
SGCE-207ENST00000447873 MARCH1Q8TCQ1 289 aa16■□□□□ 0.15
SGCE-207ENST00000447873 LEAP2Q969E1 77 aa16■□□□□ 0.15
SGCE-207ENST00000447873 MRGPRFQ96AM1 343 aa16■□□□□ 0.15
SGCE-207ENST00000447873 METTL8Q9H825 291 aaKnown RBP16■□□□□ 0.15
SGCE-207ENST00000447873 KPTNQ9Y664 436 aa16■□□□□ 0.15
SGCE-207ENST00000447873 SPNP16150 400 aa16■□□□□ 0.15
SGCE-207ENST00000447873 LUMP51884 338 aaPredicted RBP16■□□□□ 0.15
SGCE-207ENST00000447873 UTF1Q5T230 341 aa16■□□□□ 0.15
SGCE-207ENST00000447873 Q8N7P7 452 aa16■□□□□ 0.15
SGCE-207ENST00000447873 CHPT1Q8WUD6 406 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms