RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ZNF134P52741 427 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 MXD1Q05195 221 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 HMGN3Q15651 99 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 HIST2H2BDQ6DRA6 164 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 CCDC144NLQ6NUI1 221 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 Q6ZS46 218 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 LINC00311Q8N616 119 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 DRAM1Q8N682 238 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 OR56B1Q8NGI3 324 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 OR56B4Q8NH76 319 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 CAPSLQ8WWF8 208 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 CFHR4Q92496 578 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 RBMXL1Q96E39 390 aaKnown RBP11.88□□□□□ -0.51
HDAC4-204ENST00000446876 CENPOQ9BU64 300 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 RANBP3Q9H6Z4 567 aaPredicted RBP11.88□□□□□ -0.51
HDAC4-204ENST00000446876 OR2S2Q9NQN1 319 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 RAB22AQ9UL26 194 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 A0A087WXM4 84 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 SH2D7A6NKC9 451 aaPredicted RBP11.87□□□□□ -0.51
HDAC4-204ENST00000446876 NOTOA8MTQ0 251 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 OOSP1A8MZH6 123 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 SNRNP70P08621 437 aaKnown RBP11.87□□□□□ -0.51
HDAC4-204ENST00000446876 TGFBR1P36897 503 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 MNDAP41218 407 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 KIR2DS4P43632 304 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 ARHGDIBP52566 201 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 BLCAPP62952 87 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 TMEM95Q3KNT9 176 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 CT45A1Q5HYN5 189 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 ZNF880Q6PDB4 577 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 Q6ZTK2 550 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 CT45A3Q8NHU0 189 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 KCTD7Q96MP8 289 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 OCSTAMPQ9BR26 566 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 SLC25A33Q9BSK2 321 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 ZNF696Q9H7X3 374 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 RAB9BQ9NP90 201 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 DAPK2Q9UIK4 370 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 HSF4Q9ULV5 492 aa11.87□□□□□ -0.51
HDAC4-204ENST00000446876 A0A075B6Q4 140 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 IGHV3-72A0A0B4J1Y9 119 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 SNRPBP14678 240 aaKnown RBP11.86□□□□□ -0.51
HDAC4-204ENST00000446876 RAB7AP51149 207 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 TMEM30BQ3MIR4 351 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 MORN2Q502X0 79 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 SFXN4Q6P4A7 337 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 SLC25A48Q6ZT89 311 aaKnown RBP11.86□□□□□ -0.51
HDAC4-204ENST00000446876 ZNF554Q86TJ5 538 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 C8orf31Q8N9H6 132 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 OR2T6Q8NHC8 308 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 IL1F10Q8WWZ1 152 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 CITED1Q99966 193 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 KCNK7Q9Y2U2 307 aa11.86□□□□□ -0.51
HDAC4-204ENST00000446876 IGHV1-3A0A0C4DH29 117 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 FAM90A9PA6NNJ1 464 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 RAB27BO00194 218 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 GNB3P16520 340 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 RAB6AP20340 208 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 RANBP1P43487 201 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 HLA-DRB3P79483 266 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 ZNF816Q0VGE8 651 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-204ENST00000446876 HES1Q14469 280 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 HNF4GQ14541 408 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 Q3ZCU0 254 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 MOB1BQ7L9L4 216 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 MOB3BQ86TA1 216 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 TPRA1Q86W33 373 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 OR8H3Q8N146 312 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 KLHDC1Q8N7A1 406 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 OR10R2Q8NGX6 335 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 LGALS14Q8TCE9 139 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 ST6GALNAC6Q969X2 333 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 GALMQ96C23 342 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 RAB3CQ96E17 227 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 YIPF6Q96EC8 236 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 RBM14Q96PK6 669 aaKnown RBP11.85□□□□□ -0.51
HDAC4-204ENST00000446876 CMSS1Q9BQ75 279 aaKnown RBP11.85□□□□□ -0.51
HDAC4-204ENST00000446876 PARP12Q9H0J9 701 aaKnown RBP11.85□□□□□ -0.51
HDAC4-204ENST00000446876 ATG5Q9H1Y0 275 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 VCX3AQ9NNX9 186 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 C12orf4Q9NQ89 552 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 ABRACLQ9P1F3 81 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 JPT1Q9UK76 154 aa11.85□□□□□ -0.51
HDAC4-204ENST00000446876 TRBV6-6A0A0A6YYG2 114 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 MFNGO00587 321 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 OR2F2O95006 317 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 IGKV1D-33P01593 117 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 IGKV1-33P01594 117 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 GAPDHP04406 335 aaKnown RBP11.84□□□□□ -0.51
HDAC4-204ENST00000446876 VSIG10L2P0DP72 767 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 IL3RAP26951 378 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 LSM3P62310 102 aaKnown RBP11.84□□□□□ -0.51
HDAC4-204ENST00000446876 HTD2P86397 168 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 ARSJQ5FYB0 599 aaPredicted RBP11.84□□□□□ -0.51
HDAC4-204ENST00000446876 LYG1Q8N1E2 194 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 Q8N2B8 174 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 C11orf44Q8N8P7 122 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 SGMS2Q8NHU3 365 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 RTN4IP1Q8WWV3 396 aaPredicted RBP11.84□□□□□ -0.51
HDAC4-204ENST00000446876 ABHD14AQ9BUJ0 271 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms