RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 SOCS1O15524 211 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 IGKV1D-33P01593 117 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 IGKV1-33P01594 117 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 TMEM11P17152 192 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 GABARAPL2P60520 117 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 GNMTQ14749 295 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 RAB11BQ15907 218 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 NSUN5P1Q3KNT7 163 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 CT45A1Q5HYN5 189 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 C8orf31Q8N9H6 132 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 OR52L2PQ8NGH6 319 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 CT45A3Q8NHU0 189 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 RBMXL1Q96E39 390 aaKnown RBP11.75□□□□□ -0.53
USE1-202ENST00000445667 RAB9BQ9NP90 201 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 OR2S2Q9NQN1 319 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 PLEKHJ1Q9NW61 149 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 V9GY05 133 aa11.75□□□□□ -0.53
USE1-202ENST00000445667 VWFP04275 2813 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 C2orf76Q3KRA6 126 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 Q3ZCU0 254 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 MORN2Q502X0 79 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 HES5Q5TA89 166 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 SLC25A48Q6ZT89 311 aaKnown RBP11.74□□□□□ -0.53
USE1-202ENST00000445667 OR2W3Q7Z3T1 314 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 CENPVQ7Z7K6 275 aaPredicted RBP11.74□□□□□ -0.53
USE1-202ENST00000445667 SPARTQ8N0X7 666 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 OR5AU1Q8NGC0 362 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 RTN4IP1Q8WWV3 396 aaPredicted RBP11.74□□□□□ -0.53
USE1-202ENST00000445667 ST6GALNAC6Q969X2 333 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 FAM3DQ96BQ1 224 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 CITED2Q99967 270 aaPredicted RBP11.74□□□□□ -0.53
USE1-202ENST00000445667 URM1Q9BTM9 101 aaKnown RBP11.74□□□□□ -0.53
USE1-202ENST00000445667 Q9H521 79 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 NDUFB11Q9NX14 153 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 MOB4Q9Y3A3 225 aa11.74□□□□□ -0.53
USE1-202ENST00000445667 SHISA3A0PJX4 238 aa11.73□□□□□ -0.53
USE1-202ENST00000445667 ZNF736B4DX44 427 aaPredicted RBP11.73□□□□□ -0.53
USE1-202ENST00000445667 MRPS14O60783 128 aaKnown RBP11.73□□□□□ -0.53
USE1-202ENST00000445667 IL3RAP26951 378 aa11.73□□□□□ -0.53
USE1-202ENST00000445667 PPP1CCP36873 323 aaKnown RBP11.73□□□□□ -0.53
USE1-202ENST00000445667 VEGFCP49767 419 aa11.73□□□□□ -0.53
USE1-202ENST00000445667 TMEM50BP56557 158 aa11.73□□□□□ -0.53
USE1-202ENST00000445667 DEFA6Q01524 100 aa11.73□□□□□ -0.53
USE1-202ENST00000445667 PLA2G7Q13093 441 aa11.73□□□□□ -0.53
USE1-202ENST00000445667 TMEM30BQ3MIR4 351 aa11.73□□□□□ -0.53
USE1-202ENST00000445667 Q6ZPA2 131 aa11.73□□□□□ -0.53
USE1-202ENST00000445667 SVOPQ8N4V2 548 aa11.73□□□□□ -0.53
USE1-202ENST00000445667 FAM89BQ8N5H3 189 aa11.73□□□□□ -0.53
USE1-202ENST00000445667 SETD6Q8TBK2 473 aa11.73□□□□□ -0.53
USE1-202ENST00000445667 EAF1Q96JC9 268 aaPredicted RBP11.73□□□□□ -0.53
USE1-202ENST00000445667 CHMP1AQ9HD42 196 aaPredicted RBP11.73□□□□□ -0.53
USE1-202ENST00000445667 TRDV1A0A1B0GX56 115 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 M0QZK8 103 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 KCNAB3O43448 404 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 NAPSAO96009 420 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 PSMB9P28065 219 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 OR10A3P58181 314 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 EBI3Q14213 229 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 HMGN3Q15651 99 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 UBE2UQ5VVX9 321 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 CD200R1LQ6Q8B3 271 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 C10orf99Q6UWK7 81 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 ZNF554Q86TJ5 538 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 C5orf56Q8N8D9 126 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 GALMQ96C23 342 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 HDHD3Q9BSH5 251 aaPredicted RBP11.72□□□□□ -0.53
USE1-202ENST00000445667 YTHDF1Q9BYJ9 559 aaKnown RBP11.72□□□□□ -0.53
USE1-202ENST00000445667 STEAP1Q9UHE8 339 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 AK3Q9UIJ7 227 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 LRRC42Q9Y546 428 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 CMYA5Q8N3K9 4069 aa11.72□□□□□ -0.53
USE1-202ENST00000445667 MEGF8Q7Z7M0 2845 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 TRAV1-2A0A0B4J238 106 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 TMEM272A0A1B0GTI8 110 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 FOXI3A8MTJ6 420 aaPredicted RBP11.71□□□□□ -0.53
USE1-202ENST00000445667 ADARB2-AS1A8MUL3 147 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 PDCD5O14737 125 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 LDLRAD4O15165 306 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 WIPF1O43516 503 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 CD1BP29016 333 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 PSMD7P51665 324 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 HTD2P86397 168 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 TCTEX1D4Q5JR98 221 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 STEAP3Q658P3 488 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 C22orf42Q6IC83 251 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 ZNF880Q6PDB4 577 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 NDUFA11Q86Y39 141 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 TGIF2LXQ8IUE1 241 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 IL1F10Q8WWZ1 152 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 ARHGAP5-AS1Q96IT6 56 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 PECRQ9BY49 303 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 JPT1Q9UK76 154 aa11.71□□□□□ -0.53
USE1-202ENST00000445667 RRP15Q9Y3B9 282 aaKnown RBP11.71□□□□□ -0.53
USE1-202ENST00000445667 WNK1Q9H4A3 2382 aa11.71□□□□□ -0.54
USE1-202ENST00000445667 A0A0B4J203 849 aa11.7□□□□□ -0.54
USE1-202ENST00000445667 A0A1W2PRX2 142 aa11.7□□□□□ -0.54
USE1-202ENST00000445667 NCBP2LA6PVI3 153 aaKnown RBP11.7□□□□□ -0.54
USE1-202ENST00000445667 FGF16O43320 207 aa11.7□□□□□ -0.54
USE1-202ENST00000445667 YPEL1O60688 119 aa11.7□□□□□ -0.54
USE1-202ENST00000445667 MYL9P24844 172 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms