RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 HCFC1P51610 2035 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 IGKV1D-17A0A075B6S4 117 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 PPIAL4EA0A075B759 164 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 IGKV1D-8A0A087WSZ0 117 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 TRGV10A0A0A0MS01 117 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 TRAV14DV4A0A0A6YYC5 116 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 TRGV8A0A0C4DH27 118 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 IGKV1-6A0A0C4DH72 117 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 KBTBD11-OT1A0A1B0GTJ5 212 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 hCG_1809904A0A1W2PP81 198 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 A0A1W2PPE2 198 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 KANTRA0A1W2PQU2 76 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 A0A1W2PR64 198 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 A0A1W2PRV1 198 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 LINC00862A6NCI5 91 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 C5orf51A6NDU8 294 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 NKX6-3A6NJ46 265 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 ZSCAN5BA6NJL1 495 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 A6NLC8 198 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 C12orf77C9JDV5 145 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 ATP6V1G2-DDX39BF2Z307 99 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 FNDC10F2Z333 226 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 PPIAL4DF5H284 164 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 H0YL77 283 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 C15orf65H3BRN8 121 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 TMEM178BH3BS89 294 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 SDCBPO00560 298 aaPredicted RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 GOSR2O14653 212 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 TOR1AO14656 332 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 ATXN7O15265 892 aaPredicted RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 HSPA12AO43301 675 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 TXNL1O43396 289 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 BCL2L11O43521 198 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 GPR137BO60478 399 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 PSPNO60542 156 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 PITX3O75364 302 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 MED6O75586 246 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 PGLYRP1O75594 196 aaPredicted RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 DEDDO75618 318 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 AGFG2O95081 481 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 HPRT1P00492 218 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 IGHV2-70P01814 119 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 MBPP02686 304 aaPredicted RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 SERPINE2P07093 398 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 LIPFP07098 398 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 GRPP07492 148 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 SCTP09683 121 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 OR5AC1P0C628 307 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 OR8U8P0C7N1 319 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 SEC11BP0C7V7 166 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 PPIAL4FP0DN26 164 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 TPT1P13693 172 aaKnown RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 DAOP14920 347 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 PGAM2P15259 253 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 PAX1P15863 534 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 RCC1P18754 421 aaPredicted RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 SPINK2P20155 84 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 AADACP22760 399 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 IL2RGP31785 369 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 MC5RP33032 325 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 GABRA2P47869 451 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 COMPP49747 757 aaPredicted RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 ERVS71-1P61550 626 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 COL10A1Q03692 680 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 TLE1Q04724 770 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 EIF4EBP1Q13541 118 aaPredicted RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 PMS2P11Q13670 270 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF266Q14584 549 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 GNMTQ14749 295 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 HERPUD1Q15011 391 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 SSX2Q16385 188 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 ATP6V1FQ16864 119 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 HFEQ30201 348 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF672Q499Z4 452 aaPredicted RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 MORN2Q502X0 79 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 RNASE12Q5GAN4 147 aaKnown RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 NMSQ5H8A3 153 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 KRBOX4Q5JUW0 171 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 SPATA46Q5T0L3 261 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 THOC7Q6I9Y2 204 aaKnown RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 FAAP20Q6NZ36 180 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 HEPN1Q6WQI6 88 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 C20orf204Q6ZNR8 217 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 Q6ZPA2 131 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 NCCRP1Q6ZVX7 275 aaPredicted RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 TMUB2Q71RG4 321 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 RTN4RL2Q86UN3 420 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF429Q86V71 674 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF695Q8IW36 515 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 MUC15Q8N387 334 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 RPRMLQ8N4K4 120 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 COMMD1Q8N668 190 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 ADAD2Q8NCV1 583 aaKnown RBP2.36□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF680Q8NEM1 530 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 OR11H4Q8NGC9 324 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 OR4D5Q8NGN0 318 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 C8orf46Q8TAG6 207 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 LRRC29Q8WV35 223 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 RNF141Q8WVD5 230 aa2.36□□□□□ -2.03
LINC00393-201ENST00000443621 C17orf50Q8WW18 174 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms