RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 OR5D13Q8NGL4 314 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 PSMF1Q92530 271 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 NRXN2Q9P2S2 1712 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 PXMP4Q9Y6I8 212 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 ZNF646O15015 1829 aaPredicted RBP4.34□□□□□ -1.71
HERC1-201ENST00000443617 H3BP45 60 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 SERF1AO75920 110 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 FOXF1Q12946 379 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 CALHM1Q8IU99 346 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 GCNT2Q8N0V5 402 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 UHRF2Q96PU4 802 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 IGKV1-9A0A0C4DH69 117 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 PDCD1Q15116 288 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 TDRG1Q3Y452 100 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 ZNF439Q8NDP4 499 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 OR1F12Q8NHA8 337 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 SHISA7A6NL88 538 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 NPIPB7O75200 414 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 LHFPL6Q9Y693 200 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 NPIPA3F8WFD2 350 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 DHRS3O75911 302 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 NDUFB4O95168 129 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 C17orf67Q0P5P2 114 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 OR5B3Q8NH48 314 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 C10orf35Q96D05 121 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 SCARF2Q96GP6 870 aaPredicted RBP4.34□□□□□ -1.71
HERC1-201ENST00000443617 RALGAPA2Q2PPJ7 1873 aa4.34□□□□□ -1.71
HERC1-201ENST00000443617 H0Y980 276 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 MMP23AO75900 390 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 IGHEP01854 428 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 CDC42EP3Q9UKI2 254 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 COX11Q9Y6N1 276 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 ZNF831Q5JPB2 1677 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 C2orf72A6NCS6 295 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 ZNF253O75346 499 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 IL1F10Q8WWZ1 152 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 GABRG3Q99928 467 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 PPP1R3CQ9UQK1 317 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 SLC25A6P12236 298 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 ID3Q02535 119 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 KCNMB1Q16558 191 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 PRR27Q6MZM9 219 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 MRPL43Q8N983 215 aaKnown RBP4.34□□□□□ -1.72
HERC1-201ENST00000443617 SFRP2Q96HF1 295 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 TMEM204Q9BSN7 226 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 KIR2DS5A0A0G2JLQ3 304 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 A0A0G2JNG1 304 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 C17orf112F2Z3M2 114 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 KIR2DS3K7RE56 304 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 CLDN15P56746 228 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 KIR2DS5Q14953 304 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 SPPL3Q8TCT6 385 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 ZBP1Q9H171 429 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 SERGEFQ9UGK8 458 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 COL6A6A6NMZ7 2263 aa4.34□□□□□ -1.72
HERC1-201ENST00000443617 LOC102725191A0A1B0GVB3 256 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 PGLYRP1O75594 196 aaPredicted RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 IL3RAP26951 378 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 MPLP40238 635 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 FUT6P51993 359 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 LINC01551Q86U37 167 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 ADIPOR1Q96A54 375 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 CHRDL1Q9BU40 450 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 CCL1P22362 96 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 QTRT1Q9BXR0 403 aaKnown RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 TBL2Q9Y4P3 447 aaKnown RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 MED12LQ86YW9 2145 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 MS4A18H0YCH9 400 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 M0QZ24 198 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 DEGS1O15121 323 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 CDKN1AP38936 164 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 MS4A18Q3C1V0 323 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 TIGITQ495A1 244 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 LDLRAD2Q5SZI1 272 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 LHFPL2Q6ZUX7 228 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 NRN1Q9NPD7 142 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 SERTAD4Q9NUC0 356 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 LOC102724200A0A096LPH7 203 aaPredicted RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 M0R135 149 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 WDR1O75083 606 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 DRD1P21728 446 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 RPL23P62829 140 aaKnown RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 ZP4Q12836 540 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 CNN3Q15417 329 aaKnown RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 ZNF799Q96GE5 643 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 PYGO2Q9BRQ0 406 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 THBS3P49746 956 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 SUMO3P55854 103 aaPredicted RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 PCBD1P61457 104 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 ZFP36L1Q07352 338 aaKnown RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 RPEL1Q2QD12 228 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 LRRC75BQ2VPJ9 315 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 LYPD6Q86Y78 171 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 OSR2Q8N2R0 312 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 PLSCR2Q9NRY7 297 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 RAC2P15153 192 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 COL16A1Q07092 1604 aaPredicted RBP4.33□□□□□ -1.72
HERC1-201ENST00000443617 FER1L5A0AVI2 2057 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 A0A1W2PRS3 328 aa4.33□□□□□ -1.72
HERC1-201ENST00000443617 CNKSR3Q6P9H4 555 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms