RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 THBS3P49746 956 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 ZNF137PP52743 207 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 HTD2P86397 168 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 DGCR2P98153 550 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 ST3GAL4Q11206 333 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 KIR2DS1Q14954 304 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 OR2G6Q5TZ20 316 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 RAB12Q6IQ22 244 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 TMEM65Q6PI78 240 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 SLC25A48Q6ZT89 311 aaKnown RBP6.15□□□□□ -1.42
CD44-211ENST00000442151 STPG2Q8N412 459 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 KLHL30-AS1Q8NEE0 82 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 OR5M8Q8NGP6 311 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 OR8U1Q8NH10 309 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 RTN4IP1Q8WWV3 396 aaPredicted RBP6.15□□□□□ -1.42
CD44-211ENST00000442151 NEDD4LQ96PU5 975 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 SELENOIQ9C0D9 397 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 DCLRE1BQ9H816 532 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 PLCXD1Q9NUJ7 323 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 STEAP1Q9UHE8 339 aa6.15□□□□□ -1.42
CD44-211ENST00000442151 TRBV5-7A0A0A0MS05 114 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 C15orf65H3BRN8 121 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 CCL24O00175 119 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 ARPC1BO15143 372 aaKnown RBP6.15□□□□□ -1.43
CD44-211ENST00000442151 CRTAPO75718 401 aaPredicted RBP6.15□□□□□ -1.43
CD44-211ENST00000442151 SOX6P35712 828 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 CDX1P47902 265 aaPredicted RBP6.15□□□□□ -1.43
CD44-211ENST00000442151 WNT4P56705 351 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 TRAM1Q15629 374 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 TCTEX1D4Q5JR98 221 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 VAX1Q5SQQ9 334 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 C9orf66Q5T8R8 295 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 OR2W3Q7Z3T1 314 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 RNF144BQ7Z419 303 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 LINC00482Q8N8I6 264 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 PHYHIPQ92561 330 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 GGHQ92820 318 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 LEAP2Q969E1 77 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 MUL1Q969V5 352 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 GALMQ96C23 342 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 S1PR3Q99500 378 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 CENPOQ9BU64 300 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 OR2S2Q9NQN1 319 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 RCC2Q9P258 522 aaKnown RBP6.15□□□□□ -1.43
CD44-211ENST00000442151 KIAA1456Q9P272 454 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 JPT1Q9UK76 154 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 KIAA2026Q5HYC2 2103 aa6.15□□□□□ -1.43
CD44-211ENST00000442151 CMYA5Q8N3K9 4069 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 H0YHG0 523 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 YPEL1O60688 119 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 PDCD6O75340 191 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 IGHV3-7P01780 117 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 MAS1P04201 325 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 MGMTP16455 207 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 ATF4P18848 351 aaPredicted RBP6.14□□□□□ -1.43
CD44-211ENST00000442151 CELP19835 753 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 CD40LGP29965 261 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 MC5RP33032 325 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 GPR12P47775 334 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 INSL3P51460 131 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 PSMD7P51665 324 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 ADARB1P78563 741 aaKnown RBP6.14□□□□□ -1.43
CD44-211ENST00000442151 TNP2Q05952 138 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 EGFEM1PQ0D2K5 195 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 TMEM267Q0VDI3 215 aaPredicted RBP6.14□□□□□ -1.43
CD44-211ENST00000442151 RNLSQ5VYX0 342 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 FAM71F2Q6NXP2 309 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 ZNF329Q86UD4 541 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 MRPL41Q8IXM3 137 aaKnown RBP6.14□□□□□ -1.43
CD44-211ENST00000442151 GAPTQ8N292 157 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 KCNG3Q8TAE7 436 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 RGP1Q92546 391 aaPredicted RBP6.14□□□□□ -1.43
CD44-211ENST00000442151 YPEL2Q96QA6 119 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 ZNF251Q9BRH9 671 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 MND1Q9BWT6 205 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 PIPOXQ9P0Z9 390 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 PSORS1C1Q9UIG5 152 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 RNF150Q9ULK6 438 aa6.14□□□□□ -1.43
CD44-211ENST00000442151 C12orf77C9JDV5 145 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 SC5DO75845 299 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 HBZP02008 142 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 PRB2P02812 416 aaPredicted RBP6.13□□□□□ -1.43
CD44-211ENST00000442151 CD69Q07108 199 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 SMN1Q16637 294 aaKnown RBP6.13□□□□□ -1.43
CD44-211ENST00000442151 MORN2Q502X0 79 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 Q8N6K4 173 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 NANOGP1Q8N7R0 232 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 Q8N9W7 124 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 ST6GALNAC6Q969X2 333 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 DERL3Q96Q80 235 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 RNF5Q99942 180 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 URM1Q9BTM9 101 aaKnown RBP6.13□□□□□ -1.43
CD44-211ENST00000442151 TAF9BQ9HBM6 251 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 CLEC2DQ9UHP7 191 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 TPRKBQ9Y3C4 175 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 NOTCH1P46531 2555 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 TRAV39A0A0B4J263 110 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 A0A1W2PPE3 182 aa6.13□□□□□ -1.43
CD44-211ENST00000442151 SH2D7A6NKC9 451 aaPredicted RBP6.13□□□□□ -1.43
CD44-211ENST00000442151 RBBP9O75884 186 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms