RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 A0A1B0GW64 132 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 TMEM238C9JI98 176 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 NPIPA2E9PIF3 369 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 NXPH2O95156 264 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 PPYP01298 95 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 IFNA1P01562 189 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 CTXN2P0C2S0 81 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 C1QTNF9P0C862 333 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 CD1BP29016 333 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 EXT1Q16394 746 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 DOK3Q7L591 496 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 FAM131CQ96AQ9 280 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ACY3Q96HD9 319 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 SLC35E1Q96K37 410 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF552Q9H707 407 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-214ENST00000441542 CLEC5AQ9NY25 188 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 PLEK2Q9NYT0 353 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 CISD1Q9NZ45 108 aaKnown RBP6.48□□□□□ -1.37
HDAC9-214ENST00000441542 TP73-AS1Q9UF72 201 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 KIR2DL5BA0A0G2JN68 375 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 KIR2DL5BA0A0G2JPC4 375 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 A0A0G2JRQ6 117 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 SIRPB1O00241 398 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 SH2D1BO14796 132 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 SERF1AO75920 110 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 IL6RP08887 468 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ADMP35318 185 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 HHEXQ03014 270 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ARL16Q0P5N6 197 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 FUT7Q11130 342 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 SHHQ15465 462 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ACOT6Q3I5F7 207 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-214ENST00000441542 FFAR4Q5NUL3 377 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 SMIM15Q7Z3B0 74 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 GRINAQ7Z429 371 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 KIR2DL5AQ8N109 375 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ST6GALNAC6Q969X2 333 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ZC2HC1AQ96GY0 325 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 LYZL4Q96KX0 146 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 KCNK17Q96T54 332 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ALKBH7Q9BT30 221 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ST3GAL6Q9Y274 331 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 KIAA1549LQ6ZVL6 1849 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 UMODP07911 640 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 MPLP40238 635 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 MDH2P40926 338 aaKnown RBP6.48□□□□□ -1.37
HDAC9-214ENST00000441542 PSMB3P49720 205 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 DUSP3P51452 185 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-214ENST00000441542 SPATA45Q537H7 98 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 LHFPL4Q7Z7J7 247 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ODF3L1Q8IXM7 274 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 SGMS2Q8NHU3 365 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 DPF1Q92782 380 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ALKBH3Q96Q83 286 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-214ENST00000441542 SPIN2AQ99865 258 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 SPIN2BQ9BPZ2 258 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 DERL1Q9BUN8 251 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 TMEM106BQ9NUM4 274 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ATP23Q9Y6H3 246 aa6.48□□□□□ -1.37
HDAC9-214ENST00000441542 ASXL3Q9C0F0 2248 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 TRBV11-1A0A0K0K1C0 115 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 CXorf51AA0A1B0GTR3 108 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 KIAA1324LA8MWY0 1029 aaPredicted RBP6.47□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF732B4DXR9 585 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 RBMXL2O75526 392 aaKnown RBP6.47□□□□□ -1.37
HDAC9-214ENST00000441542 SERPINE2P07093 398 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 FRMD6-AS1P0C7T7 363 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 DTYMKP23919 212 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 GFERP55789 205 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 PPP1CBP62140 327 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 MEF2BQ02080 365 aaPredicted RBP6.47□□□□□ -1.37
HDAC9-214ENST00000441542 C9orf50Q5SZB4 431 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF776Q68DI1 518 aaPredicted RBP6.47□□□□□ -1.37
HDAC9-214ENST00000441542 KCNIP4Q6PIL6 250 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 ZNF818PQ6ZRF7 136 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 S100A7AQ86SG5 101 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 YAF2Q8IY57 180 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 SAXO1Q8IYX7 474 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 H1FOOQ8IZA3 346 aaPredicted RBP6.47□□□□□ -1.37
HDAC9-214ENST00000441542 SELENOHQ8IZQ5 122 aaKnown RBP6.47□□□□□ -1.37
HDAC9-214ENST00000441542 DEFB119Q8N690 84 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 OR5D13Q8NGL4 314 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 PIGCQ92535 297 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 BORCS8Q96FH0 119 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 TECTBQ96PL2 329 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 RASL10BQ96S79 203 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 CTDSP1Q9GZU7 261 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 ANAPC10Q9UM13 185 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 ZFP30Q9Y2G7 519 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 RNF114Q9Y508 228 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 TIMM8BQ9Y5J9 83 aaPredicted RBP6.47□□□□□ -1.37
HDAC9-214ENST00000441542 MTCH2Q9Y6C9 303 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 GTF3C1Q12789 2109 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 IGKV1D-13A0A0B4J2D9 117 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 IGHV3-64DA0A0J9YX35 117 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 TNFSF14O43557 240 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 GDF9O60383 454 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 SCTP09683 121 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 IGKV1-13P0DP09 117 aa6.47□□□□□ -1.37
HDAC9-214ENST00000441542 TNFSF4P23510 183 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms