RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SLC33A1O00400 549 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 TNFRSF13BO14836 293 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 PLA2G10O15496 165 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 TPD52L2O43399 206 aaKnown RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 GSTZ1O43708 216 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 PDCD6O75340 191 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FCN3O75636 299 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 RP2O75695 350 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 UPK1BO75841 260 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 NXPH2O95156 264 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 OR2H2O95918 312 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 HAND1O96004 215 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 CYB5AP00167 134 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 MELTFP08582 738 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A15PP0C7V4 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A13PP0C7W8 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A14PP0C7W9 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A24PP0C7X0 464 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 DUX4L2P0CJ85 424 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 DUX4L3P0CJ86 424 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 DUX4L4P0CJ87 422 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 DUX4L5P0CJ88 424 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 DUX4L6P0CJ89 424 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 DUX4L7P0CJ90 424 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 PSG2P11465 335 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 LYL1P12980 280 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 IL7P13232 177 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 SELLP14151 372 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 HIST1H1DP16402 221 aaKnown RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 GLRA1P23415 457 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 TNFSF4P23510 183 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 PTBP1P26599 531 aaKnown RBP eCLIP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 BLVRBP30043 206 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 TALDO1P37837 337 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 LGALS4P56470 323 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 IL13RA2Q14627 380 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF146Q15072 292 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 MPV17LQ2QL34 196 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 PCGF3Q3KNV8 242 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 PYDC2Q56P42 97 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 TEX36Q5VZQ5 186 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 SFRP4Q6FHJ7 346 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 DUX4L9Q6RFH8 374 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 BAIAP2L2Q6UXY1 529 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 DCDC5Q6ZRR9 648 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 Q6ZTK2 550 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 C5orf24Q7Z6I8 188 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 Q8IYB0 196 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FGFRL1Q8N441 504 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 GDPD1Q8N9F7 314 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 BOLLQ8N9W6 283 aaKnown RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 CHST4Q8NCG5 386 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 OR5T2Q8NGG2 359 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 OR56B1Q8NGI3 324 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 PLPPR1Q8TBJ4 325 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 GPX8Q8TED1 209 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 SMIM4Q8WVI0 70 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 NUDCD2Q8WVJ2 157 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 ERGIC1Q969X5 290 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 RAB3CQ96E17 227 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 MRPS24Q96EL2 167 aaKnown RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 URM1Q9BTM9 101 aaKnown RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 FAAP24Q9BTP7 215 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 CCDC32Q9BV29 185 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 SAP30LQ9HAJ7 183 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 RHOFQ9HBH0 211 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 DIABLOQ9NR28 239 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 ABCB10Q9NRK6 738 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 TMEM106BQ9NUM4 274 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 GAR1Q9NY12 217 aaKnown RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 NLKQ9UBE8 527 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 RNF7Q9UBF6 113 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 DUX4Q9UBX2 424 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 AK3Q9UIJ7 227 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 ANAPC10Q9UM13 185 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 PPP1R3CQ9UQK1 317 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 RBMX2Q9Y388 322 aaKnown RBP3.89□□□□□ -1.79
PTPN4-206ENST00000441089 POMT1Q9Y6A1 747 aa3.89□□□□□ -1.79
PTPN4-206ENST00000441089 IGKV1D-8A0A087WSZ0 117 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 IGHV1-69-2A0A0G2JMI3 117 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 OR2AT4A6NND4 320 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 GABARAPH6UMI1 98 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 LGALS8O00214 317 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 SIRPB1O00241 398 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 HSPB6O14558 160 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 ORC5O43913 435 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF737O75373 536 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 FOXH1O75593 365 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 OR7C1O76099 320 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-206ENST00000441089 TPPPO94811 219 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 IGHV2-5P01817 119 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 GYPAP02724 150 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 FCER2P06734 321 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 LPLP06858 475 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF44P15621 663 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 FUT3P21217 361 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 PRSS3P35030 304 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 RANBP1P43487 201 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 OR3A1P47881 315 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 PTTG1IPP53801 180 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms