RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 IDH3GP51553 393 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 RAB11AP62491 216 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 SPANXN5Q5MJ07 72 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 H1FOOQ8IZA3 346 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 GNPNAT1Q96EK6 184 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 ZNF665Q9H7R5 613 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 ATPIF1Q9UII2 106 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 CLN5O75503 358 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 OR2H2O95918 312 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 S100GP29377 79 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 MPLP40238 635 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 ERVFRD-1P60508 538 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 TESK1Q15569 626 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 OR51I2Q9H344 312 aa11.49□□□□□ -0.57
HERPUD1-204ENST00000439977 BDP1A6H8Y1 2624 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 TECTAO75443 2155 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 TGIF2-C20orf24A0A0A6YYL0 155 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 CLEC18AA5D8T8 446 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 IFNA5P01569 189 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 IGKV1-5P01602 117 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 CEACAM6P40199 344 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 ELLP55199 621 aaPredicted RBP11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 TAS2R30P59541 319 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 RNFT1Q5M7Z0 435 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 SSX7Q7RTT5 188 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 CLEC18CQ8NCF0 446 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 CLDND2Q8NHS1 167 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 Q8WTZ3 238 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 MUCL1Q96DR8 90 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 TMEM265A0A087WTH1 108 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 KIAA1324LA8MWY0 1029 aaPredicted RBP11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 SS18L1O75177 396 aaPredicted RBP11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 WISP2O76076 250 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 PMP22Q01453 160 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 TLE4Q04727 773 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 KIAA0141Q14154 515 aaPredicted RBP11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 ZNF674Q2M3X9 581 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 PDZD11Q5EBL8 140 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 DHRS13Q6UX07 377 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 HEPN1Q6WQI6 88 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 GUCD1Q96NT3 240 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 SPRY4Q9C004 299 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 PSENENQ9NZ42 101 aa11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 SMG1Q96Q15 3661 aaKnown RBP11.48□□□□□ -0.57
HERPUD1-204ENST00000439977 SYNGR2O43760 224 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 LYZL6O75951 148 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 IGHV2-5P01817 119 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 NDUFA6P56556 154 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 LINC00205P59089 165 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 B2MP61769 119 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 BAXQ07812 192 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 OR8G2PQ6IF36 304 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 ZNF808Q8N4W9 903 aaPredicted RBP11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 SCCPDHQ8NBX0 429 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 ABI3Q9P2A4 366 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 NXPH2O95156 264 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 COX5BP10606 129 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 CTAG1AP78358 180 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 IL24Q13007 206 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 SLC10A1Q14973 349 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 Q6P435 159 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 ZNF826PQ6ZT77 177 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 SCGB1C1Q8TD33 95 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 PLK3Q9H4B4 646 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 GSN-AS1Q9NRJ2 163 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 MPC1Q9Y5U8 109 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 DCHS1Q96JQ0 3298 aa11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 TNRC6BQ9UPQ9 1833 aaKnown RBP11.47□□□□□ -0.57
HERPUD1-204ENST00000439977 AP4M1O00189 453 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 KRASP01116 189 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 FABP1P07148 127 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 SP1P08047 785 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 ZNF585BQ52M93 769 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 BEND4Q6ZU67 534 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 HAPLN4Q86UW8 402 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 TPRX1Q8N7U7 411 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 METTL1Q9UBP6 276 aaKnown RBP11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 MAP1BP46821 2468 aaKnown RBP11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 A0A1B0GU03 582 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 WNT9BO14905 357 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 RAMP3O60896 148 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 CD55P08174 381 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 ZNF726P1Q15940 193 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 SRSF7Q16629 238 aaKnown RBP eCLIP11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 TMEM164Q5U3C3 297 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 LILRB2Q8N423 598 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 WDYHV1Q96HA8 205 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 RIMS4Q9H426 269 aaPredicted RBP11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 MIOXQ9UGB7 285 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 FZR1Q9UM11 496 aa11.46□□□□□ -0.57
HERPUD1-204ENST00000439977 TRBV23-1A0A0A0MS06 115 aa11.46□□□□□ -0.58
HERPUD1-204ENST00000439977 OR5B21A6NL26 309 aa11.46□□□□□ -0.58
HERPUD1-204ENST00000439977 CYB5BO43169 146 aa11.46□□□□□ -0.58
HERPUD1-204ENST00000439977 MDKP21741 143 aaPredicted RBP11.46□□□□□ -0.58
HERPUD1-204ENST00000439977 ELOBQ15370 118 aa11.46□□□□□ -0.58
HERPUD1-204ENST00000439977 SPINK9Q5DT21 86 aa11.46□□□□□ -0.58
HERPUD1-204ENST00000439977 PLPPR2Q96GM1 343 aa11.46□□□□□ -0.58
HERPUD1-204ENST00000439977 SPRR3Q9UBC9 169 aa11.46□□□□□ -0.58
HERPUD1-204ENST00000439977 SVILO95425 2214 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms