RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 SH2D7A6NKC9 451 aaPredicted RBP10.6□□□□□ -0.71
LINC00399-201ENST00000439008 RAB27BO00194 218 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 PDCD5O14737 125 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 SPINT2O43291 252 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 PPP1CCP36873 323 aaKnown RBP10.6□□□□□ -0.71
LINC00399-201ENST00000439008 PSMD7P51665 324 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 MADCAM1Q13477 382 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 MORN2Q502X0 79 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 C6orf183Q5T699 404 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 LIAT1Q6ZQX7 453 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 SLC25A48Q6ZT89 311 aaKnown RBP10.6□□□□□ -0.71
LINC00399-201ENST00000439008 DRAM1Q8N682 238 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 TSPAN14Q8NG11 270 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 OR56B4Q8NH76 319 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 TOMM40LQ969M1 308 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 RPEQ96AT9 228 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 YIPF6Q96EC8 236 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 URM1Q9BTM9 101 aaKnown RBP10.6□□□□□ -0.71
LINC00399-201ENST00000439008 ZNF696Q9H7X3 374 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 ELF5Q9UKW6 265 aaPredicted RBP10.6□□□□□ -0.71
LINC00399-201ENST00000439008 RAB22AQ9UL26 194 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 HSF4Q9ULV5 492 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 SSR3Q9UNL2 185 aa10.6□□□□□ -0.71
LINC00399-201ENST00000439008 TRBV6-6A0A0A6YYG2 114 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 IGHV3-72A0A0B4J1Y9 119 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 LOC100506127A0A0U1RQW1 187 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 NOTOA8MTQ0 251 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 OOSP1A8MZH6 123 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 ZNF736B4DX44 427 aaPredicted RBP10.59□□□□□ -0.71
LINC00399-201ENST00000439008 HSD17B6O14756 317 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 SNRNP70P08621 437 aaKnown RBP10.59□□□□□ -0.71
LINC00399-201ENST00000439008 SNRPBP14678 240 aaKnown RBP10.59□□□□□ -0.71
LINC00399-201ENST00000439008 CEACAM3P40198 252 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 MXD1Q05195 221 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 ZNF816Q0VGE8 651 aaPredicted RBP10.59□□□□□ -0.71
LINC00399-201ENST00000439008 Q6ZTK2 550 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 ODF3L1Q8IXM7 274 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 C8orf31Q8N9H6 132 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 OR4C13Q8NGP0 309 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 OR10X1Q8NGY0 326 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 WIPF2Q8TF74 440 aaPredicted RBP10.59□□□□□ -0.71
LINC00399-201ENST00000439008 OCSTAMPQ9BR26 566 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 RANBP3Q9H6Z4 567 aaPredicted RBP10.59□□□□□ -0.71
LINC00399-201ENST00000439008 OR2S2Q9NQN1 319 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 GNG12Q9UBI6 72 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 AMMECR1Q9Y4X0 333 aaPredicted RBP10.59□□□□□ -0.71
LINC00399-201ENST00000439008 CMYA5Q8N3K9 4069 aa10.59□□□□□ -0.71
LINC00399-201ENST00000439008 MEGF8Q7Z7M0 2845 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 IGHV1-3A0A0C4DH29 117 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 IGKV1-6A0A0C4DH72 117 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 RRP9O43818 475 aaKnown RBP10.58□□□□□ -0.72
LINC00399-201ENST00000439008 TNFAIP8O95379 198 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 SMIM18P0DKX4 95 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 ZNF137PP52743 207 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 TRAT1Q6PIZ9 186 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 ZNF554Q86TJ5 538 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 OR5H6Q8NGV6 325 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 CAPSLQ8WWF8 208 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 CREB3L1Q96BA8 519 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 RBM14Q96PK6 669 aaKnown RBP10.58□□□□□ -0.72
LINC00399-201ENST00000439008 SLC25A33Q9BSK2 321 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 NPFFR1Q9GZQ6 430 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 Q9N2K0 584 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 RAB18Q9NP72 206 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 DAPK2Q9UIK4 370 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 PITPNC1Q9UKF7 332 aa10.58□□□□□ -0.72
LINC00399-201ENST00000439008 NOTCH1P46531 2555 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 A0A087WXM4 84 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 H3BUI4 141 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 MFNGO00587 321 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 SCTP09683 121 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 GNB3P16520 340 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 RAB6AP20340 208 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 BRS3P32247 399 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 HTD2P86397 168 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 HNF4GQ14541 408 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 HERPUD1Q15011 391 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 Q3ZCU0 254 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 SFXN4Q6P4A7 337 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 TPRA1Q86W33 373 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 OR8H3Q8N146 312 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 KLHDC1Q8N7A1 406 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 C11orf44Q8N8P7 122 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 OR56B1Q8NGI3 324 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 OR10R2Q8NGX6 335 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 SETD6Q8TBK2 473 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 RTN4IP1Q8WWV3 396 aaPredicted RBP10.57□□□□□ -0.72
LINC00399-201ENST00000439008 KCTD7Q96MP8 289 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 KCNIP1Q9NZI2 227 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 OR1A1Q9P1Q5 309 aa10.57□□□□□ -0.72
LINC00399-201ENST00000439008 YPEL1O60688 119 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 OR2F2O95006 317 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 IGKV1D-33P01593 117 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 IGKV1-33P01594 117 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 GAPDHP04406 335 aaKnown RBP10.56□□□□□ -0.72
LINC00399-201ENST00000439008 MNDAP41218 407 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 OR3A3P47888 321 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 RAB7AP51149 207 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 EBI3Q14213 229 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 PRR31Q5SQ13 230 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms