RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 STARD4Q96DR4 205 aa11.79□□□□□ -0.52
PTCHD3-201ENST00000438700 ABHD14AQ9BUJ0 271 aa11.79□□□□□ -0.52
PTCHD3-201ENST00000438700 OPN3Q9H1Y3 402 aaPredicted RBP11.79□□□□□ -0.52
PTCHD3-201ENST00000438700 PLSCR4Q9NRQ2 329 aa11.79□□□□□ -0.52
PTCHD3-201ENST00000438700 BSNQ9UPA5 3926 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 GPR37O15354 613 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 DANCRP0C864 163 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 PMELP40967 661 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 RPS10P46783 165 aaKnown RBP11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 CEBPGP53567 150 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 CCL20P78556 96 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 TBC1D28Q2M2D7 210 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 TBC1D26Q86UD7 250 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 GAPTQ8N292 157 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 ZNF610Q8N9Z0 462 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 SUMF2Q8NBJ7 301 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 RHOVQ96L33 236 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 PFDN5Q99471 154 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 TCEAL7Q9BRU2 100 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 TUBA4BQ9H853 241 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 FAM212BQ9NTI7 297 aaPredicted RBP11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 ZDHHC8Q9ULC8 765 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 PROCRQ9UNN8 238 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 POMT1Q9Y6A1 747 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 NBEAQ8NFP9 2946 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 IGKV1-6A0A0C4DH72 117 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 E5RGE8 158 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 HSD17B6O14756 317 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 WDR1O75083 606 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 ERVS71-1P61550 626 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 MPV17LQ2QL34 196 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 PDZD11Q5EBL8 140 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 UBAC2Q8NBM4 344 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 TOLLIPQ9H0E2 274 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 TMPRSS5Q9H3S3 457 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 C19orf12Q9NSK7 152 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 NSG2Q9Y328 171 aa11.78□□□□□ -0.52
PTCHD3-201ENST00000438700 KIAA2026Q5HYC2 2103 aa11.77□□□□□ -0.52
PTCHD3-201ENST00000438700 TNFSF12O43508 249 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 CGAP01215 116 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 GAPDHP04406 335 aaKnown RBP11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 GPX4P36969 197 aaPredicted RBP11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 PLA2G5P39877 138 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 NDUFA6P56556 154 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 GNG3P63215 75 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 KIAA0141Q14154 515 aaPredicted RBP11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 KRTCAP3Q53RY4 240 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 C1orf185Q5T7R7 199 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 CXorf67Q86X51 503 aaPredicted RBP11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 Q8NA96 180 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 KCNJ16Q9NPI9 418 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 UBE2J1Q9Y385 318 aaPredicted RBP11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 URGCP-MRPS24S4R325 110 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 NKX2-6A6NCS4 301 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 HOXC12P31275 282 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 ZNF324BQ6AW86 544 aaPredicted RBP11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 TMEM182Q6ZP80 229 aaPredicted RBP11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 ZNF573Q86YE8 665 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 CISD2Q8N5K1 135 aaKnown RBP11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 FAM122AQ96E09 287 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 TMEM222Q9H0R3 208 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 OPA3Q9H6K4 179 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 PLEKHA2Q9HB19 425 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 RAXQ9Y2V3 346 aa11.77□□□□□ -0.53
PTCHD3-201ENST00000438700 TRAV39A0A0B4J263 110 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 TRAV24A0A0B4J272 114 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 TRDCB7Z8K6 153 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 SLC33A1O00400 549 aaPredicted RBP11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 ST8SIA3O43173 380 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 OR2C1O95371 312 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 HMGN3Q15651 99 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 GFI1BQ5VTD9 330 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 FAM58AQ8N1B3 248 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 ZNF383Q8NA42 475 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 C1orf162Q8NEQ5 155 aaPredicted RBP11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 OR1J1Q8NGS3 322 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 OR2J1Q9GZK6 312 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 CCL28Q9NRJ3 127 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 TMED3Q9Y3Q3 217 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 MPC1Q9Y5U8 109 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 ATP23Q9Y6H3 246 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 OR5B21A6NL26 309 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 ZNF729A6NN14 1252 aaPredicted RBP11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 AGFG2O95081 481 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 NXPH3O95157 252 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 FAM87AP0C7U9 286 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 TMPRSS3P57727 454 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 RAB2AP61019 212 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 HAGHQ16775 308 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 HEPN1Q6WQI6 88 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 SPNS3Q6ZMD2 512 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 Q6ZS49 121 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 ZNF695Q8IW36 515 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 WDR31Q8NA23 367 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 FAM213BQ8TBF2 198 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 FAM57AQ8TBR7 257 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 MRPL30Q8TCC3 161 aaKnown RBP11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 IL1F10Q8WWZ1 152 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 POM121Q96HA1 1249 aa11.76□□□□□ -0.53
PTCHD3-201ENST00000438700 SLC35B3Q9H1N7 401 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms