RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 RLN3Q8WXF3 142 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 DOCK5Q9H7D0 1870 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 H0Y980 276 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 MPLP40238 635 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 CCSMST1Q4G0I0 132 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 OR10AC1Q8NH08 325 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 HCFC1R1Q9NWW0 138 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 KCNE3Q9Y6H6 103 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 SOCS7O14512 581 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 F11P03951 625 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 ZNF124Q15973 351 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 MRPL52Q86TS9 123 aaKnown RBP10.15□□□□□ -0.78
PTCH1-209ENST00000437951 STPG3Q8N7X2 389 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 OR13C6PQ8NH95 151 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 SLC25A40Q8TBP6 338 aa10.15□□□□□ -0.78
PTCH1-209ENST00000437951 CEP250Q9BV73 2442 aa10.15□□□□□ -0.79
PTCH1-209ENST00000437951 K7EQS6 105 aa10.15□□□□□ -0.79
PTCH1-209ENST00000437951 LINC00869P0C866 280 aa10.15□□□□□ -0.79
PTCH1-209ENST00000437951 ZNF137PP52743 207 aa10.15□□□□□ -0.79
PTCH1-209ENST00000437951 SKP2Q13309 424 aa10.15□□□□□ -0.79
PTCH1-209ENST00000437951 HOGA1Q86XE5 327 aa10.15□□□□□ -0.79
PTCH1-209ENST00000437951 GAPTQ8N292 157 aa10.15□□□□□ -0.79
PTCH1-209ENST00000437951 ABHD3Q8WU67 409 aa10.15□□□□□ -0.79
PTCH1-209ENST00000437951 GHITMQ9H3K2 345 aa10.15□□□□□ -0.79
PTCH1-209ENST00000437951 PLSCR2Q9NRY7 297 aa10.15□□□□□ -0.79
PTCH1-209ENST00000437951 SPCS1Q9Y6A9 102 aa10.15□□□□□ -0.79
PTCH1-209ENST00000437951 A0A087WWC5 75 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 PRDX2P32119 198 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 DLK2Q6UY11 383 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.14□□□□□ -0.79
PTCH1-209ENST00000437951 RGP1Q92546 391 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-209ENST00000437951 SCNM1Q9BWG6 230 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 OR11H12B2RN74 326 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 C10orf128Q5T292 105 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 RHBDD2Q6NTF9 364 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 OR11H1Q8NG94 326 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 OR11H2Q8NH07 326 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 SLC37A2Q8TED4 501 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 NRSN2Q9GZP1 204 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 ABCA4P78363 2273 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 NKX2-2O95096 273 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 TNXAQ16473 311 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 ZNF683Q8IZ20 524 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 OR4D9Q8NGE8 314 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 ORAI1Q96D31 301 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 SLC26A1Q9H2B4 701 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 DNAJC4Q9NNZ3 241 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 DOCK3Q8IZD9 2030 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 TRGC1P0CF51 173 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 CAPZBP47756 277 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 ROM1Q03395 351 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 TTC9CQ8N5M4 171 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 OR6X1Q8NH79 312 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 ZNF414Q96IQ9 312 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 TAF1P21675 1872 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 HYPMO75409 117 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 CXCL2P19875 107 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 CDAP32320 146 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 TCTN1Q2MV58 587 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 NHLRC3Q5JS37 347 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 FAM71F2Q6NXP2 309 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 SSMEM1Q8WWF3 244 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 KMT2EQ8IZD2 1858 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 PLA2G10O15496 165 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 ATP5LO75964 103 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 GVQW1Q8N7I0 195 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 HMGCLL1Q8TB92 370 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 MRGPRX3Q96LB0 322 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 PDFQ9HBH1 243 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 GLRX2Q9NS18 164 aa10.14□□□□□ -0.79
PTCH1-209ENST00000437951 TRAV38-1A0A0B4J264 116 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 S1PR2O95136 353 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 MRPS11P82912 194 aaKnown RBP10.13□□□□□ -0.79
PTCH1-209ENST00000437951 IRF3Q14653 427 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 ZNF660Q6AZW8 331 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-209ENST00000437951 TMEM30AQ9NV96 361 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 SSC5DA1L4H1 1573 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 NKX2-6A6NCS4 301 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 FOXF1Q12946 379 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 TMEM78Q5T7P6 136 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 ZFAND6Q6FIF0 208 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 TP53I13Q8NBR0 393 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-209ENST00000437951 MGST2Q99735 147 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 DNAJB12Q9NXW2 375 aaKnown RBP10.13□□□□□ -0.79
PTCH1-209ENST00000437951 KIAA2026Q5HYC2 2103 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 RPL34P49207 117 aaKnown RBP10.13□□□□□ -0.79
PTCH1-209ENST00000437951 Q5PR19 223 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 ELOVL5Q9NYP7 299 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 HSPB7Q9UBY9 170 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 SS18L1O75177 396 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-209ENST00000437951 KCNS1Q96KK3 526 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 KLK10O43240 276 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 ZNF418Q8TF45 676 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-209ENST00000437951 SPANXCQ9NY87 97 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 CA6P23280 308 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 DEFB109BQ30KR1 87 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 OR10J6PQ8NGY7 276 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 RNF122Q9H9V4 155 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 SIRT5Q9NXA8 310 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 TMEM250H0YL14 139 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms