RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 HBZP02008 142 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 MT-ND4P03905 459 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 OR8U8P0C7N1 319 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 LIMS3P0CW19 117 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 LIMS4P0CW20 117 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 SLC2A2P11168 524 aaPredicted RBP6.09□□□□□ -1.43
VPS50-203ENST00000436177 GABRB1P18505 474 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 CDX1P47902 265 aaPredicted RBP6.09□□□□□ -1.43
VPS50-203ENST00000436177 ETV1P50549 477 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 TAS2R43P59537 309 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 KIR2DS1Q14954 304 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 ZNF260Q3ZCT1 412 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 Q499Y3 187 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 YIF1BQ5BJH7 314 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 SYT6Q5T7P8 510 aaPredicted RBP6.09□□□□□ -1.43
VPS50-203ENST00000436177 OR2G6Q5TZ20 316 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 SLC25A48Q6ZT89 311 aaKnown RBP6.09□□□□□ -1.43
VPS50-203ENST00000436177 PQLC1Q8N2U9 271 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 Q8N9W7 124 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 OR4K15Q8NH41 348 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 CYGBQ8WWM9 190 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 THRSPQ92748 146 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 GHSRQ92847 366 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 MUL1Q969V5 352 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 MRPS24Q96EL2 167 aaKnown RBP6.09□□□□□ -1.43
VPS50-203ENST00000436177 PRR25Q96S07 402 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 ZNF251Q9BRH9 671 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 FGF20Q9NP95 211 aaPredicted RBP6.09□□□□□ -1.43
VPS50-203ENST00000436177 OR2S2Q9NQN1 319 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 PARP11Q9NR21 331 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 BABAM2Q9NXR7 383 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 SMPD3Q9NY59 655 aaPredicted RBP6.09□□□□□ -1.43
VPS50-203ENST00000436177 ZNF581Q9P0T4 197 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 KIAA1456Q9P272 454 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 ERGIC3Q9Y282 383 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 PEX16Q9Y5Y5 336 aa6.09□□□□□ -1.43
VPS50-203ENST00000436177 KMT2CQ8NEZ4 4911 aaKnown RBP6.09□□□□□ -1.43
VPS50-203ENST00000436177 LANCL1O43813 399 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 CRTAPO75718 401 aaPredicted RBP6.08□□□□□ -1.44
VPS50-203ENST00000436177 BAG2O95816 211 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 MGMTP16455 207 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 MAPK3P27361 379 aaPredicted RBP6.08□□□□□ -1.44
VPS50-203ENST00000436177 INSL3P51460 131 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 LSAMPQ13449 338 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 PLGLAQ15195 96 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 FAM27D1Q5T7N8 215 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 STEAP3Q658P3 488 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 XAF1Q6GPH4 301 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 GLIPR1L1Q6UWM5 242 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 Q8N6K4 173 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 NKAIN3Q8N8D7 197 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 RNF152Q8N8N0 203 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 TMEM104Q8NE00 496 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 SETD9Q8NE22 299 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 OR13C5Q8NGS8 318 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 ABHD5Q8WTS1 349 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 FBLIM1Q8WUP2 373 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 KCTD7Q96MP8 289 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 RDH12Q96NR8 316 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 CHCHD6Q9BRQ6 235 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 ABHD14AQ9BUJ0 271 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 SELENOIQ9C0D9 397 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 CST11Q9H112 138 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 TAF9BQ9HBM6 251 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 MRPS18AQ9NVS2 196 aaKnown RBP6.08□□□□□ -1.44
VPS50-203ENST00000436177 ABRACLQ9P1F3 81 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 STEAP1Q9UHE8 339 aa6.08□□□□□ -1.44
VPS50-203ENST00000436177 DIMT1Q9UNQ2 313 aaKnown RBP6.08□□□□□ -1.44
VPS50-203ENST00000436177 ZNF256Q9Y2P7 627 aaPredicted RBP6.08□□□□□ -1.44
VPS50-203ENST00000436177 DNAH3Q8TD57 4116 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 TRAV41A0A0B4J266 112 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 PNMA8CA0A1B0GUJ8 204 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 UBE2QL1A1L167 161 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 FAM90A10PA6NDY2 464 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 FAM90A7PA6NKC0 464 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 LINC01548A6NM66 108 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 FAM90A23PA8MXZ1 464 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 ZNF736B4DX44 427 aaPredicted RBP6.07□□□□□ -1.44
VPS50-203ENST00000436177 MYL12BO14950 172 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 SLC31A2O15432 143 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 IGF1P05019 195 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 GLAP06280 429 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 FUT3P21217 361 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 CAPGP40121 348 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 ZNF137PP52743 207 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 ACTBP60709 375 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 GABPB1Q06547 395 aaPredicted RBP6.07□□□□□ -1.44
VPS50-203ENST00000436177 ZNF616Q08AN1 781 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 SMN1Q16637 294 aaKnown RBP6.07□□□□□ -1.44
VPS50-203ENST00000436177 CT45A1Q5HYN5 189 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 ZNF554Q86TJ5 538 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 FAM71E2Q8N5Q1 922 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 ZFP41Q8N8Y5 198 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 OR2AK2Q8NG84 335 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 OR11H1Q8NG94 326 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 OR1N2Q8NGR9 330 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 OR1L1Q8NH94 360 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 CT45A3Q8NHU0 189 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 ST6GALNAC6Q969X2 333 aa6.07□□□□□ -1.44
VPS50-203ENST00000436177 GALMQ96C23 342 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms