RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 MMP26Q9NRE1 261 aa10.07□□□□□ -0.8
CTCFL-209ENST00000433949 KCNIP1Q9NZI2 227 aa10.07□□□□□ -0.8
CTCFL-209ENST00000433949 SPEF1Q9Y4P9 236 aa10.07□□□□□ -0.8
CTCFL-209ENST00000433949 TMEM30CPA0ZSE6 113 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 ZNF705EA8MWA4 302 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-209ENST00000433949 IFNL4K9M1U5 179 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 LGALS8O00214 317 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 SLC25A6P12236 298 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 MMP9P14780 707 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 CA7P43166 264 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 SULT1A2P50226 295 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 HMGN3Q15651 99 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 SMIM21Q3B7S5 101 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 NMSQ5H8A3 153 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 VKORC1Q9BQB6 163 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 SFXN3Q9BWM7 321 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 CACNA1DQ01668 2161 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 NKX2-6A6NCS4 301 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 A6NLC8 198 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 HEXAP06865 529 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 FABP6P51161 128 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 SLC35E4Q6ICL7 350 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 ACP7Q6ZNF0 438 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 C11orf53Q8IXP5 236 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 DMBX1Q8NFW5 382 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 ARV1Q9H2C2 271 aa10.06□□□□□ -0.8
CTCFL-209ENST00000433949 SERPINE2P07093 398 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 SEC11BP0C7V7 166 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 CD200P41217 278 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 FAM27E3Q08E93 113 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 WDR82Q6UXN9 313 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 C5orf24Q7Z6I8 188 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 MUCL1Q96DR8 90 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 SLC25A31Q9H0C2 315 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 FAM212BQ9NTI7 297 aaPredicted RBP10.05□□□□□ -0.8
CTCFL-209ENST00000433949 LIN7CQ9NUP9 197 aaKnown RBP10.05□□□□□ -0.8
CTCFL-209ENST00000433949 OR14J1Q9UGF5 321 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 RCL1Q9Y2P8 373 aaKnown RBP10.05□□□□□ -0.8
CTCFL-209ENST00000433949 OOEPA6NGQ2 149 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 RNF212BA8MTL3 300 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 ADAM20O43506 726 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 CRYAAP02489 173 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 OR2C3Q8N628 320 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 ZBTB34Q8NCN2 500 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 GALMQ96C23 342 aa10.05□□□□□ -0.8
CTCFL-209ENST00000433949 RBM7Q9Y580 266 aaKnown RBP10.05□□□□□ -0.8
CTCFL-209ENST00000433949 A0A1B0GU03 582 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 SCO1O75880 301 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 ID3Q02535 119 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 PAX5Q02548 391 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 PJVKQ0ZLH3 352 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 ZNF266Q14584 549 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 TESK1Q15569 626 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 Q6ZR03 302 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 FAM90A1Q86YD7 464 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 LSM10Q969L4 123 aaKnown RBP10.04□□□□□ -0.8
CTCFL-209ENST00000433949 ERGIC1Q969X5 290 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 C11orf1Q9H5F2 150 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 PLEKHF2Q9H8W4 249 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 SEBOXQ9HB31 216 aaPredicted RBP10.04□□□□□ -0.8
CTCFL-209ENST00000433949 PARP11Q9NR21 331 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 OR1A1Q9P1Q5 309 aa10.04□□□□□ -0.8
CTCFL-209ENST00000433949 TMA7Q9Y2S6 64 aaKnown RBP10.04□□□□□ -0.8
CTCFL-209ENST00000433949 FAM90A27PA6NNH2 459 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 A8MXE2 369 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 PSPNO60542 156 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 PTBP3O95758 552 aaKnown RBP10.03□□□□□ -0.8
CTCFL-209ENST00000433949 APOC3P02656 99 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 RAB5CP51148 216 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 F2RL1P55085 397 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 VAMP2P63027 116 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 CDSNQ15517 529 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 SWI5Q1ZZU3 235 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 FAM209AQ5JX71 171 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 PXDC1Q5TGL8 231 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 TRAT1Q6PIZ9 186 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 PRR18Q8N4B5 295 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 BPIFCQ8NFQ6 507 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 OR10Z1Q8NGY1 313 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 NARS2Q96I59 477 aaKnown RBP10.03□□□□□ -0.8
CTCFL-209ENST00000433949 GINS3Q9BRX5 216 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 SMIM3Q9BZL3 60 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 TOLLIPQ9H0E2 274 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 MSL2Q9HCI7 577 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 LYRM2Q9NU23 88 aaPredicted RBP10.03□□□□□ -0.8
CTCFL-209ENST00000433949 FLNCQ14315 2725 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 MYO18BQ8IUG5 2567 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 HIVEP3Q5T1R4 2406 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 WRBO00258 174 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 TNFSF12O43508 249 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 MED6O75586 246 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 IGHV3-13P01766 116 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 GLRXP35754 106 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 CFHR2P36980 270 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 CEACAM6P40199 344 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 RPS23P62266 143 aaKnown RBP10.03□□□□□ -0.8
CTCFL-209ENST00000433949 EWSR1Q01844 656 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTCFL-209ENST00000433949 BAXQ07812 192 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 MSMO1Q15800 293 aa10.03□□□□□ -0.8
CTCFL-209ENST00000433949 ZNF826PQ6ZT77 177 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms