RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.48□□□□□ -2.17
PTPN4-205ENST00000433888 K7ERS5 55 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 CXCR6O00574 342 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 PHYHO14832 338 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 CRTAPO75718 401 aaPredicted RBP1.48□□□□□ -2.17
PTPN4-205ENST00000433888 KRT7P08729 469 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 ZNF708P17019 499 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 RPL12P30050 165 aaKnown RBP1.48□□□□□ -2.17
PTPN4-205ENST00000433888 AGTR1P30556 359 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 JOSD1Q15040 202 aaPredicted RBP1.48□□□□□ -2.17
PTPN4-205ENST00000433888 UAP1Q16222 522 aaPredicted RBP1.48□□□□□ -2.17
PTPN4-205ENST00000433888 C1orf195Q5TG92 126 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 ZNF660Q6AZW8 331 aaPredicted RBP1.48□□□□□ -2.17
PTPN4-205ENST00000433888 CYHR1Q6ZMK1 362 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 RASSF6Q6ZTQ3 369 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 Q8N402 240 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 DNAAF3Q8N9W5 541 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 OR10D3Q8NH80 312 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 SPPL2BQ8TCT7 592 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 KCTD4Q8WVF5 259 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 RAB8BQ92930 207 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 TAMM41Q96BW9 452 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 DGCR14Q96DF8 476 aaKnown RBP1.48□□□□□ -2.17
PTPN4-205ENST00000433888 SPZ1Q9BXG8 430 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 BCL2L14Q9BZR8 327 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 SLC22A4Q9H015 551 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 ALX4Q9H161 411 aaPredicted RBP1.48□□□□□ -2.17
PTPN4-205ENST00000433888 PARVAQ9NVD7 372 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 USE1Q9NZ43 259 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 PHLDA3Q9Y5J5 127 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 SNX10Q9Y5X0 201 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 SHANK1Q9Y566 2161 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 CRB1P82279 1406 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 CACNA1SQ13698 1873 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 POLR3AO14802 1390 aaPredicted RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 BRD4O60885 1362 aaPredicted RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 CLUHO75153 1309 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 IGHV3-21A0A0B4J1V1 117 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 LRRN3E7EW58 273 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 H3BMM0 161 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 M0QYV0 167 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 KCNK1O00180 336 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 EEF1E1O43324 174 aaKnown RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 SSNA1O43805 119 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 IFNA5P01569 189 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 IGHMP01871 453 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 HBZP02008 142 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 IGLV7-43P04211 117 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 CALB1P05937 261 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 OCM2P0CE71 109 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 CTLA4P16410 223 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 CD34P28906 385 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 CRABP2P29373 138 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 IDH2P48735 452 aaKnown RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 PSMB3P49720 205 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 NUDT2P50583 147 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 LINC00313P59037 77 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 HERVK_113P63121 156 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 MGAT3Q09327 533 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 TMEM267Q0VDI3 215 aaPredicted RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 APOFQ13790 326 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 SLC9A3R2Q15599 337 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 MAPK14Q16539 360 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 SLC36A2Q495M3 483 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 SPIN4Q56A73 249 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 FAM104BQ5XKR9 115 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 TMEM215Q68D42 235 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 OR10K2Q6IF99 312 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 C16orf47Q6ZP98 133 aaPredicted RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 DCXRQ7Z4W1 244 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 FAM19A5Q7Z5A7 132 aaPredicted RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 MTERF4Q7Z6M4 381 aaKnown RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 S100A7AQ86SG5 101 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 MSRB3Q8IXL7 192 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 HS3ST5Q8IZT8 346 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 OR8K1Q8NGG5 319 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 HAVCR2Q8TDQ0 301 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 ZCCHC13Q8WW36 166 aaKnown RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 ASB13Q8WXK3 278 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 PTH2Q96A98 100 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 UBE2WQ96B02 151 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 EBNA1BP2Q99848 306 aaKnown RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 GNB1LQ9BYB4 327 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 XPNPEP1Q9NQW7 623 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 ZNF492Q9P255 531 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 OR5V1Q9UGF6 321 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 SLC23A2Q9UGH3 650 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 LINC00527Q9UJ94 153 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 DNAJC12Q9UKB3 198 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 NUP153P49790 1475 aaKnown RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 BAZ1BQ9UIG0 1483 aaKnown RBP1.47□□□□□ -2.17
PTPN4-205ENST00000433888 ATRNO75882 1429 aa1.47□□□□□ -2.17
PTPN4-205ENST00000433888 IGHV3OR16-8A0A075B7F1 116 aa1.46□□□□□ -2.18
PTPN4-205ENST00000433888 TMED7-TICAM2A0A0A6YYA0 188 aa1.46□□□□□ -2.18
PTPN4-205ENST00000433888 TRAV40A0A0B4J280 105 aa1.46□□□□□ -2.18
PTPN4-205ENST00000433888 TMEM250H0YL14 139 aa1.46□□□□□ -2.18
PTPN4-205ENST00000433888 SLC16A4O15374 487 aa1.46□□□□□ -2.18
PTPN4-205ENST00000433888 STX10O60499 249 aa1.46□□□□□ -2.18
PTPN4-205ENST00000433888 POP7O75817 140 aaKnown RBP1.46□□□□□ -2.18
PTPN4-205ENST00000433888 ATP5HO75947 161 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms