RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 JPT1Q9UK76 154 aa21.76■■□□□ 1.07
TMEM248-205ENST00000433271 ENSAO43768 121 aaKnown RBP21.75■■□□□ 1.07
TMEM248-205ENST00000433271 TUSC2O75896 110 aa21.75■■□□□ 1.07
TMEM248-205ENST00000433271 LOXL1Q08397 574 aaPredicted RBP21.75■■□□□ 1.07
TMEM248-205ENST00000433271 LTC4SQ16873 150 aa21.75■■□□□ 1.07
TMEM248-205ENST00000433271 C11orf42Q8N5U0 333 aa21.75■■□□□ 1.07
TMEM248-205ENST00000433271 TOLLIPQ9H0E2 274 aa21.75■■□□□ 1.07
TMEM248-205ENST00000433271 OCEL1Q9H607 264 aa21.75■■□□□ 1.07
TMEM248-205ENST00000433271 GNG12Q9UBI6 72 aa21.75■■□□□ 1.07
TMEM248-205ENST00000433271 MMP23AO75900 390 aa21.74■■□□□ 1.07
TMEM248-205ENST00000433271 RBP4P02753 201 aa21.74■■□□□ 1.07
TMEM248-205ENST00000433271 OXA1LQ15070 435 aa21.74■■□□□ 1.07
TMEM248-205ENST00000433271 RBMS2Q15434 407 aaKnown RBP21.74■■□□□ 1.07
TMEM248-205ENST00000433271 PRAMEF5Q5TYX0 476 aa21.74■■□□□ 1.07
TMEM248-205ENST00000433271 OR13C8Q8NGS7 320 aa21.74■■□□□ 1.07
TMEM248-205ENST00000433271 CHPT1Q8WUD6 406 aa21.74■■□□□ 1.07
TMEM248-205ENST00000433271 SLC25A21Q9BQT8 299 aaPredicted RBP21.74■■□□□ 1.07
TMEM248-205ENST00000433271 GFOD1Q9NXC2 390 aa21.74■■□□□ 1.07
TMEM248-205ENST00000433271 RDH8Q9NYR8 311 aa21.74■■□□□ 1.07
TMEM248-205ENST00000433271 ZNF69Q9UC07 566 aa21.74■■□□□ 1.07
TMEM248-205ENST00000433271 YLPM1P49750 1951 aaKnown RBP21.74■■□□□ 1.07
TMEM248-205ENST00000433271 RNF223E7ERA6 249 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 PPYP01298 95 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 GNMTQ14749 295 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 AADACL3Q5VUY0 350 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 MRGPRFQ96AM1 343 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 C1orf159Q96HA4 380 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 OR2W1Q9Y3N9 320 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 ARHGAP32A7KAX9 2087 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 IGHV3-43A0A0B4J1X8 118 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 IGHV2-70DA0A0C4DH43 119 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 hCG_1809904A0A1W2PP81 198 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 A0A1W2PPE2 198 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 A0A1W2PR64 198 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 A0A1W2PRV1 198 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 YPEL1O60688 119 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 NDUFB6O95139 128 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 TCRBP04435 133 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 IGHV3-43DP0DP04 118 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 AADACP22760 399 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 PPP1CCP36873 323 aaKnown RBP21.73■■□□□ 1.07
TMEM248-205ENST00000433271 ERVFRD-1P60508 538 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 TRIM16LQ309B1 348 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 FAM53AQ6NSI3 398 aaPredicted RBP21.73■■□□□ 1.07
TMEM248-205ENST00000433271 GLCCI1Q86VQ1 547 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 MINDY2Q8NBR6 621 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 MOB3AQ96BX8 217 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 YPEL2Q96QA6 119 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 ONECUT1Q9UBC0 465 aa21.73■■□□□ 1.07
TMEM248-205ENST00000433271 VPS13CQ709C8 3753 aa21.72■■□□□ 1.07
TMEM248-205ENST00000433271 PRRC2AP48634 2157 aaKnown RBP21.72■■□□□ 1.07
TMEM248-205ENST00000433271 FLNBO75369 2602 aaKnown RBP21.72■■□□□ 1.07
TMEM248-205ENST00000433271 OR5H14A6NHG9 310 aa21.72■■□□□ 1.07
TMEM248-205ENST00000433271 SPNP16150 400 aa21.72■■□□□ 1.07
TMEM248-205ENST00000433271 NFYBP25208 207 aa21.72■■□□□ 1.07
TMEM248-205ENST00000433271 MORN2Q502X0 79 aa21.72■■□□□ 1.07
TMEM248-205ENST00000433271 KIR3DL3Q8N743 410 aa21.72■■□□□ 1.07
TMEM248-205ENST00000433271 OR10V1Q8NGI7 309 aa21.72■■□□□ 1.07
TMEM248-205ENST00000433271 MMP26Q9NRE1 261 aa21.72■■□□□ 1.07
TMEM248-205ENST00000433271 NOTCH2Q04721 2471 aa21.71■■□□□ 1.07
TMEM248-205ENST00000433271 M0R1W7 72 aa21.71■■□□□ 1.07
TMEM248-205ENST00000433271 RGS11O94810 467 aa21.71■■□□□ 1.07
TMEM248-205ENST00000433271 IGHV1-8P0DP01 117 aa21.71■■□□□ 1.07
TMEM248-205ENST00000433271 HERV-K104P61576 105 aa21.71■■□□□ 1.07
TMEM248-205ENST00000433271 CCBE1Q6UXH8 406 aaPredicted RBP21.71■■□□□ 1.07
TMEM248-205ENST00000433271 C1orf122Q6ZSJ8 110 aa21.71■■□□□ 1.07
TMEM248-205ENST00000433271 BAHCC1Q9P281 2608 aa21.71■■□□□ 1.07
TMEM248-205ENST00000433271 FAM172BPA6NC97 362 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 B4DSR2 109 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 ECI1P42126 302 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 ARF6P62330 175 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 LY6G6FQ5SQ64 297 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 PLET1Q6UQ28 207 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 CENPSQ8N2Z9 138 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 WFDC11Q8NEX6 87 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 PARP12Q9H0J9 701 aaKnown RBP21.7■■□□□ 1.06
TMEM248-205ENST00000433271 LPAR2Q9HBW0 351 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 NUBP2Q9Y5Y2 271 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 ABCA2Q9BZC7 2435 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 CSMD1Q96PZ7 3565 aa21.7■■□□□ 1.06
TMEM248-205ENST00000433271 FXYD4P59646 89 aa21.69■■□□□ 1.06
TMEM248-205ENST00000433271 BTNL3Q6UXE8 466 aa21.69■■□□□ 1.06
TMEM248-205ENST00000433271 SESN1Q9Y6P5 492 aa21.69■■□□□ 1.06
TMEM248-205ENST00000433271 SURF2Q15527 256 aaPredicted RBP21.69■■□□□ 1.06
TMEM248-205ENST00000433271 Q8N7P7 452 aa21.69■■□□□ 1.06
TMEM248-205ENST00000433271 MARCH1Q8TCQ1 289 aa21.69■■□□□ 1.06
TMEM248-205ENST00000433271 EDARADDQ8WWZ3 215 aa21.69■■□□□ 1.06
TMEM248-205ENST00000433271 MMP28Q9H239 520 aa21.69■■□□□ 1.06
TMEM248-205ENST00000433271 METTL8Q9H825 291 aaKnown RBP21.69■■□□□ 1.06
TMEM248-205ENST00000433271 NUDT15Q9NV35 164 aa21.69■■□□□ 1.06
TMEM248-205ENST00000433271 KPTNQ9Y664 436 aa21.69■■□□□ 1.06
TMEM248-205ENST00000433271 A0A087X0M5 115 aa21.68■■□□□ 1.06
TMEM248-205ENST00000433271 A0A1B0GX30 115 aa21.68■■□□□ 1.06
TMEM248-205ENST00000433271 MSMBP08118 114 aa21.68■■□□□ 1.06
TMEM248-205ENST00000433271 LUMP51884 338 aaPredicted RBP21.68■■□□□ 1.06
TMEM248-205ENST00000433271 UCP3P55916 312 aa21.68■■□□□ 1.06
TMEM248-205ENST00000433271 FAM216AQ8WUB2 273 aa21.68■■□□□ 1.06
TMEM248-205ENST00000433271 SCGB3A2Q96PL1 93 aa21.68■■□□□ 1.06
TMEM248-205ENST00000433271 FXYD6Q9H0Q3 95 aa21.68■■□□□ 1.06
TMEM248-205ENST00000433271 C20orf85Q9H1P6 137 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms