RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 K7EM74 188 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 hCG_2039718K7EN88 272 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 FFAR1O14842 300 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 SHOX2O60902 331 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 SCO1O75880 301 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 RBBP9O75884 186 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 CDRT1O95170 752 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 FADS2O95864 444 aaKnown RBP1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 MAS1P04201 325 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 IL4P05112 153 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 CD28P10747 220 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 HLA-GP17693 338 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 GTF2H1P32780 548 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 PSMB2P49721 201 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 FUT5Q11128 374 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 FAM53BQ14153 422 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 GPR176Q14439 515 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 PMVKQ15126 192 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 Q499Y3 187 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 DNLZQ5SXM8 178 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 RESP18Q5W5W9 173 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 CLEC6AQ6EIG7 209 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 PRSS54Q6PEW0 395 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 ATPAF2Q8N5M1 289 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 UBA3Q8TBC4 463 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR5P2Q8WZ92 322 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 WDR34Q96EX3 536 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 LINC00477Q96M19 166 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 BIRC8Q96P09 236 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 METTL26Q96S19 204 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 CIB1Q99828 191 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 ZNF2Q9BSG1 426 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 BBS2Q9BXC9 721 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 NLE1Q9NVX2 485 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 FBXL12Q9NXK8 326 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 FLNCQ14315 2725 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 NIPBLQ6KC79 2804 aaeCLIP1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 MTORP42345 2549 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 SPAG17Q6Q759 2223 aa1.7□□□□□ -2.14
HMGB1P27-201ENST00000431429 OTOGQ6ZRI0 2925 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 SPTBN1Q01082 2364 aaKnown RBP1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 NAV3Q8IVL0 2385 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 IGLV2-18A0A075B6J9 118 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 A0A0G2JMP0 313 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 A0A0X1KG70 313 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 HSBP1L1C9JCN9 74 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 TCAPO15273 167 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 LYPLA2O95372 231 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 FSTL3O95633 263 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 IGHV1-46P01743 117 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 MPIP34949 423 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 TGFBR1P36897 503 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 SPAM1P38567 509 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 MPV17P39210 176 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 IDH2P48735 452 aaKnown RBP1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 TGM4P49221 684 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 RAB38P57729 211 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 VSNL1P62760 191 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 BAXQ07812 192 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 ADIGQ0VDE8 80 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 STX3Q13277 289 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 XRCC4Q13426 336 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 PIGHQ14442 188 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 MAPRE2Q15555 327 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 DEFB109BQ30KR1 87 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 KLHL12Q53G59 568 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 MED27Q6P2C8 311 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 TPGS1Q6ZTW0 290 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 CYP4Z2PQ8N1L4 340 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 TMEM86AQ8N2M4 240 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 SLC25A45Q8N413 288 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR4D6Q8NGJ1 314 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 ZNF420Q8TAQ5 688 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 CCL17Q92583 94 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 RORBQ92753 470 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 CCDC127Q96BQ5 260 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 QKIQ96PU8 341 aaKnown RBP eCLIP1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 VAT1Q99536 393 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 LXNQ9BS40 222 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 MARVELD1Q9BSK0 173 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 TBL1XR1Q9BZK7 514 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 NXF2Q9GZY0 626 aaKnown RBP1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 GOLPH3Q9H4A6 298 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 FAM60AQ9NP50 221 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR2S2Q9NQN1 319 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 IL37Q9NZH6 218 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 ENPP4Q9Y6X5 453 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 CACNA1DQ01668 2161 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 SPG11Q96JI7 2443 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 CSMD1Q96PZ7 3565 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 CELSR2Q9HCU4 2923 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 LRBAP50851 2863 aa1.69□□□□□ -2.14
HMGB1P27-201ENST00000431429 CENPEQ02224 2701 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 PTPRJQ12913 1337 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 COL5A1P20908 1838 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 TSC2P49815 1807 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 MYH4Q9Y623 1939 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 F8P00451 2351 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 A0A0D9SFI3 127 aa1.68□□□□□ -2.14
HMGB1P27-201ENST00000431429 GOLGA8QA0A0J9YX86 632 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms