RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 PRRC2AP48634 2157 aaKnown RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 NBEAL1Q6ZS30 2694 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 FN1P02751 2386 aaKnown RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 KIR2DL5BA0A0G2JN68 375 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 KIR2DL5BA0A0G2JPC4 375 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 A0A0J9YY10 115 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 TRBV11-1A0A0K0K1C0 115 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 TMEM269A0A1B0GVZ9 245 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 A0A1B0GWB2 263 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 A0A1W2PPR1 153 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 FAM159BA6NKW6 160 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 SERPINE3A8MV23 424 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 E9PQ18 207 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF670-ZNF695F2Z2N8 137 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 SMLR1H3BR10 107 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 SULT2B1O00204 365 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 GPR31O00270 319 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 BCKDKO14874 412 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 PHF1O43189 567 aaPredicted RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 TGOLN2O43493 480 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 CDC40O60508 579 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 GALR3O60755 368 aaPredicted RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 SERPINA1P01009 418 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 CST1P01037 141 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 COX6A1P12074 109 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ATP1B2P14415 290 aaPredicted RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 NCK1P16333 377 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF14P17017 642 aaPredicted RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 HLA-GP17693 338 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 CNR1P21554 472 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 GNRHRP30968 328 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 IFNGR2P38484 337 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 GLP1RP43220 463 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 MAGEA3P43357 314 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 MAGEA12P43365 314 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 XCR1P46094 333 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 FGF8P55075 233 aaPredicted RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 TAS2R39P59534 338 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 RAB8AP61006 207 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 MAXP61244 160 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ERVS71-1P61550 626 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 LSM3P62310 102 aaKnown RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 RPL32P62910 135 aaKnown RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 HOXC5Q00444 222 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 IRF8Q02556 426 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 SLC10A7Q0GE19 358 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 GPR176Q14439 515 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 JOSD1Q15040 202 aaPredicted RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 RSU1Q15404 277 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 SURF2Q15527 256 aaPredicted RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 DEFB110Q30KQ9 67 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 EIPR1Q53HC9 387 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 TMEM244Q5VVB8 128 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 STEAP4Q687X5 459 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF470Q6ECI4 717 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 H3F3CQ6NXT2 135 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 DNAJC24Q6P3W2 148 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 RNASEKQ6P5S7 137 aaKnown RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 SPESP1Q6UW49 350 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ENPP6Q6UWR7 440 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 FAM131AQ6UXB0 335 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 IL34Q6ZMJ4 242 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 RNF165Q6ZSG1 346 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 GRINAQ7Z429 371 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 VRK2Q86Y07 508 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 CBLN2Q8IUK8 224 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 WDFY1Q8IWB7 410 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 RIMKLAQ8IXN7 391 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 KIR2DL5AQ8N109 375 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 UBAC2Q8NBM4 344 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 OR2T33Q8NG76 320 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 OR4E2Q8NGC2 313 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 OR4A15Q8NGL6 344 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 OR2L2Q8NH16 312 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ORAOV1Q8WV07 137 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 IL4I1Q96RQ9 567 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF382Q96SR6 550 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 STACQ99469 402 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 RNF2Q99496 336 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 PHB2Q99623 299 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 NIPSNAP1Q9BPW8 284 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 C11orf70Q9BRQ4 267 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 SNHG12Q9BXW3 62 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ACTR3CQ9C0K3 210 aaPredicted RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 OR51J1Q9H342 316 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 DHX35Q9H5Z1 703 aaKnown RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ANKRA2Q9H9E1 313 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 NMRAL1Q9HBL8 299 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 NOX3Q9HBY0 568 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ISYNA1Q9NPH2 558 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 CHRAC1Q9NRG0 131 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 SLC2A9Q9NRM0 540 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 SLC2A6Q9UGQ3 507 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 GNG8Q9UK08 70 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 FBXL3Q9UKT7 428 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 SLC7A11Q9UPY5 501 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 KLF13Q9Y2Y9 288 aaPredicted RBP3.16□□□□□ -1.9
HMGB3-203ENST00000430118 ORC6Q9Y5N6 252 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 MMP24Q9Y5R2 645 aa3.16□□□□□ -1.9
HMGB3-203ENST00000430118 COL6A5A8TX70 2615 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms