RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SLC25A48Q6ZT89 311 aaKnown RBP12.87□□□□□ -0.35
VARS-216ENST00000428445 OR1N2Q8NGR9 330 aa12.87□□□□□ -0.35
VARS-216ENST00000428445 APH1BQ8WW43 257 aa12.87□□□□□ -0.35
VARS-216ENST00000428445 SLC29A1Q99808 456 aa12.87□□□□□ -0.35
VARS-216ENST00000428445 ALX4Q9H161 411 aaPredicted RBP12.87□□□□□ -0.35
VARS-216ENST00000428445 ZNF107Q9UII5 783 aaPredicted RBP12.87□□□□□ -0.35
VARS-216ENST00000428445 CA11O75493 328 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 GLAP06280 429 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 RCC1P18754 421 aaPredicted RBP12.86□□□□□ -0.35
VARS-216ENST00000428445 ETV1P50549 477 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 ZNF137PP52743 207 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 MED21Q13503 144 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 ZNF491Q8N8L2 437 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 CASTOR1Q8WTX7 329 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 DCUN1D4Q92564 292 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 SMIM19Q96E16 107 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 CHCHD3Q9NX63 227 aaKnown RBP12.86□□□□□ -0.35
VARS-216ENST00000428445 GNG12Q9UBI6 72 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 ZNF580Q9UK33 172 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 TRAPPC2LQ9UL33 140 aa12.86□□□□□ -0.35
VARS-216ENST00000428445 A0A1W2PPK0 400 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 MCRIP1C9JLW8 97 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 I3L521 148 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 SPINT2O43291 252 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 LALBAP00709 142 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 HBZP02008 142 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 IGF1P05019 195 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 IGFBP3P17936 291 aaPredicted RBP12.85□□□□□ -0.35
VARS-216ENST00000428445 PPIFP30405 207 aaKnown RBP12.85□□□□□ -0.35
VARS-216ENST00000428445 RIPK1Q13546 671 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 GNMTQ14749 295 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 CASC10Q5T4H9 136 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 TRAT1Q6PIZ9 186 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 GAPTQ8N292 157 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 ZNF555Q8NEP9 628 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 MYOZ3Q8TDC0 251 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 ZNF184Q99676 751 aaPredicted RBP12.85□□□□□ -0.35
VARS-216ENST00000428445 EXOSC1Q9Y3B2 195 aaKnown RBP12.85□□□□□ -0.35
VARS-216ENST00000428445 SMAD5-AS1Q9Y6J3 95 aa12.85□□□□□ -0.35
VARS-216ENST00000428445 FAM90A10PA6NDY2 464 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 FAM90A7PA6NKC0 464 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 FAM90A23PA8MXZ1 464 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 ATP6V0E1O15342 81 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 OR5H8P0DN80 308 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 CHATP28329 748 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 LSAMPQ13449 338 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 MMDQ15546 238 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 YIF1BQ5BJH7 314 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 C6orf183Q5T699 404 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 ZNF554Q86TJ5 538 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 PQLC1Q8N2U9 271 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 ZFP41Q8N8Y5 198 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 OR52L2PQ8NGH6 319 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 MUC7Q8TAX7 377 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 MUL1Q969V5 352 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 RCHY1Q96PM5 261 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 BANF2Q9H503 90 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 S100A14Q9HCY8 104 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 ETAA1Q9NY74 926 aa12.84□□□□□ -0.35
VARS-216ENST00000428445 RCC2Q9P258 522 aaKnown RBP12.84□□□□□ -0.35
VARS-216ENST00000428445 DIMT1Q9UNQ2 313 aaKnown RBP12.84□□□□□ -0.35
VARS-216ENST00000428445 TRAV8-7A0A075B6U6 113 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 TRBV5-5A0A0J9YX44 114 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 UBE2QL1A1L167 161 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 WBP4O75554 376 aaKnown RBP12.83□□□□□ -0.36
VARS-216ENST00000428445 MYL12AP19105 171 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 SLURP1P55000 103 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 ZNF616Q08AN1 781 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 Q499Y3 187 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 DMKNQ6E0U4 476 aaPredicted RBP12.83□□□□□ -0.36
VARS-216ENST00000428445 TMEM65Q6PI78 240 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 ODF3L1Q8IXM7 274 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 GHSRQ92847 366 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 DLX4Q92988 240 aaPredicted RBP12.83□□□□□ -0.36
VARS-216ENST00000428445 UBE2E2Q96LR5 201 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 MRPL20Q9BYC9 149 aaKnown RBP12.83□□□□□ -0.36
VARS-216ENST00000428445 ANKRD60Q9BZ19 345 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 PARP11Q9NR21 331 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 CLEC2DQ9UHP7 191 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 VSIG4Q9Y279 399 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 LRRC42Q9Y546 428 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 PEX16Q9Y5Y5 336 aa12.83□□□□□ -0.36
VARS-216ENST00000428445 EPPK1P58107 5090 aaKnown RBP12.83□□□□□ -0.36
VARS-216ENST00000428445 IGHV7-81A0A0B4J1V7 117 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 SNRPBP14678 240 aaKnown RBP12.82□□□□□ -0.36
VARS-216ENST00000428445 SPNP16150 400 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 FSTP19883 344 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 RAB9AP51151 201 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 ACTBP60709 375 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 MORN2Q502X0 79 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 RAB12Q6IQ22 244 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 GLIPR1L1Q6UWM5 242 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 TMEM80Q96HE8 168 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 OR51J1Q9H342 316 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 ISYNA1Q9NPH2 558 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 OR2S2Q9NQN1 319 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 SMPD3Q9NY59 655 aaPredicted RBP12.82□□□□□ -0.36
VARS-216ENST00000428445 FBXO7Q9Y3I1 522 aa12.82□□□□□ -0.36
VARS-216ENST00000428445 OVOL1O14753 267 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms