RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 LGI3Q8N145 548 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 ZNF418Q8TF45 676 aaPredicted RBP9.18□□□□□ -0.94
TCOF1-204ENST00000427724 FAM222BQ8WU58 562 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 MSI2Q96DH6 328 aaKnown RBP9.18□□□□□ -0.94
TCOF1-204ENST00000427724 PATZ1Q9HBE1 687 aaKnown RBP9.18□□□□□ -0.94
TCOF1-204ENST00000427724 RCC1P18754 421 aaPredicted RBP9.18□□□□□ -0.94
TCOF1-204ENST00000427724 PIGPP57054 158 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 CST9LP1Q5W188 147 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 CABLES2Q9BTV7 478 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 AK3Q9UIJ7 227 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 SSUH2Q9Y2M2 353 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 WNK1Q9H4A3 2382 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 TRBV5-7A0A0A0MS05 114 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 CXorf65A6NEN9 183 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 M0R1X1 148 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 CLEC3BP05452 202 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 SLC25A42Q86VD7 318 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 ARHGEF39Q8N4T4 335 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 TAAR6Q96RI8 345 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 FAAP24Q9BTP7 215 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 FBXL17Q9UF56 701 aa9.18□□□□□ -0.94
TCOF1-204ENST00000427724 IGHV1-69-2A0A0G2JMI3 117 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 A0A1W2PP11 408 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 ST8SIA3O43173 380 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 CECR9P0C854 216 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 FUT3P21217 361 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 FGF7P21781 194 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 PLEKHF2Q9H8W4 249 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 SIRT7Q9NRC8 400 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 GNG13Q9P2W3 67 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 NPTNQ9Y639 398 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 MYO9AB2RTY4 2548 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 MED13Q9UHV7 2174 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 SFT2D2O95562 160 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 CST4P01036 141 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 RPL29P47914 159 aaKnown RBP9.17□□□□□ -0.94
TCOF1-204ENST00000427724 DHRS7BQ6IAN0 325 aaPredicted RBP9.17□□□□□ -0.94
TCOF1-204ENST00000427724 CLEC18BQ6UXF7 455 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 SLC35G3Q8N808 338 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 LFNGQ8NES3 379 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 RTN4IP1Q8WWV3 396 aaPredicted RBP9.17□□□□□ -0.94
TCOF1-204ENST00000427724 SAMD10Q9BYL1 202 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 GCM1Q9NP62 436 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 SLC25A10Q9UBX3 287 aaPredicted RBP9.17□□□□□ -0.94
TCOF1-204ENST00000427724 HILPDAQ9Y5L2 63 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 TGOLN2O43493 480 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 LHX2P50458 406 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 ZNF345Q14585 488 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 TESK1Q15569 626 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 HIST1H2BAQ96A08 127 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 SAT2Q96F10 170 aaPredicted RBP9.17□□□□□ -0.94
TCOF1-204ENST00000427724 ALX4Q9H161 411 aaPredicted RBP9.17□□□□□ -0.94
TCOF1-204ENST00000427724 SLC35B3Q9H1N7 401 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 C19orf12Q9NSK7 152 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 SEC14L6B5MCN3 397 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 NDUFA2O43678 99 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 OR3A1P47881 315 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 LY6EQ16553 131 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 TPRX1Q8N7U7 411 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 GFI1Q99684 422 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 GGACTQ9BVM4 153 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 MAGT1Q9H0U3 335 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 KCNK7Q9Y2U2 307 aa9.17□□□□□ -0.94
TCOF1-204ENST00000427724 TRAV39A0A0B4J263 110 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 PPP5D1E7EU14 171 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 CLDN1O95832 211 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 ZNF25P17030 456 aaPredicted RBP9.16□□□□□ -0.94
TCOF1-204ENST00000427724 CLDN18P56856 261 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 KLF14Q8TD94 323 aaPredicted RBP9.16□□□□□ -0.94
TCOF1-204ENST00000427724 SLC25A31Q9H0C2 315 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 C7orf69Q9H7B7 122 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 OR6C3Q9NZP0 311 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 PSG11Q9UQ72 335 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 NPIPB9F8W1W9 429 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 GPR37O15354 613 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 TRAF3IP2O43734 574 aaPredicted RBP9.16□□□□□ -0.94
TCOF1-204ENST00000427724 CLN5O75503 358 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 CYB5R3P00387 301 aaPredicted RBP9.16□□□□□ -0.94
TCOF1-204ENST00000427724 TTRP02766 147 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 MMP7P09237 267 aaPredicted RBP9.16□□□□□ -0.94
TCOF1-204ENST00000427724 LCN2P80188 198 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 PRSS54Q6PEW0 395 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 H2BFWTQ7Z2G1 175 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 LRP11Q86VZ4 500 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 SNX22Q96L94 193 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 ZNF488Q96MN9 340 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 IGLV1-36A0A0B4J1U3 117 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 MFNGO00587 321 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 WISP1O95388 367 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 CTXN2P0C2S0 81 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 GLRXP35754 106 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 RAB4BP61018 213 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 RPP30P78346 268 aaKnown RBP9.16□□□□□ -0.94
TCOF1-204ENST00000427724 ZNF266Q14584 549 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 TMEM268Q5VZI3 342 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 LCN15Q6UWW0 184 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 RNF133Q8WVZ7 376 aa9.16□□□□□ -0.94
TCOF1-204ENST00000427724 LRRC3CA6NJW4 275 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 LYNX1G3V0Z9 82 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 MS4A18H0YCH9 400 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms