RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 CYYR1Q96J86 154 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 TMEM56Q96MV1 263 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 TOLLIPQ9H0E2 274 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 PLEKHF2Q9H8W4 249 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 GCM1Q9NP62 436 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 LIN7CQ9NUP9 197 aaKnown RBP7.93□□□□□ -1.14
HMGB4-201ENST00000425537 RDH8Q9NYR8 311 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 GSKIPQ9P0R6 139 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 TMEM56-RWDD3S4R434 201 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 SPTA1P02549 2419 aa7.93□□□□□ -1.14
HMGB4-201ENST00000425537 RP1L1Q8IWN7 2480 aaPredicted RBP7.93□□□□□ -1.14
HMGB4-201ENST00000425537 PRRC2CQ9Y520 2896 aaKnown RBP7.92□□□□□ -1.14
HMGB4-201ENST00000425537 IGKV1D-17A0A075B6S4 117 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 TRAV14DV4A0A0A6YYC5 116 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 LGALS8O00214 317 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 HSD17B6O14756 317 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 TAAR5O14804 337 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF737O75373 536 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 HBZP02008 142 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 LYL1P12980 280 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 PVALBP20472 110 aaPredicted RBP7.92□□□□□ -1.14
HMGB4-201ENST00000425537 AGAP20933 346 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 F2RP25116 425 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 UCP1P25874 307 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 SSTR2P30874 369 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 CEBPDP49716 269 aaPredicted RBP7.92□□□□□ -1.14
HMGB4-201ENST00000425537 P2RX3P56373 397 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 CATR1Q13166 79 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 LRRC37A5PQ49AS3 106 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 TEX36Q5VZQ5 186 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 ADAM5Q6NVV9 412 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF818PQ6ZRF7 136 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 C22orf34Q6ZV56 151 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 PRR18Q8N4B5 295 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 GLYATL2Q8WU03 294 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 RBPMSQ93062 196 aaKnown RBP7.92□□□□□ -1.14
HMGB4-201ENST00000425537 ARL11Q969Q4 196 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 C14orf79Q96F83 325 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 SDSLQ96GA7 329 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 COQ2Q96H96 371 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 C18orf12Q96KH6 178 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 SAP30LQ9HAJ7 183 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 PLEKHA2Q9HB19 425 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 CCL28Q9NRJ3 127 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 FAM212BQ9NTI7 297 aaPredicted RBP7.92□□□□□ -1.14
HMGB4-201ENST00000425537 MBD2Q9UBB5 411 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 LPAR3Q9UBY5 353 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 KCNS2Q9ULS6 477 aa7.92□□□□□ -1.14
HMGB4-201ENST00000425537 SMG1Q96Q15 3661 aaKnown RBP7.92□□□□□ -1.14
HMGB4-201ENST00000425537 TRGV10A0A0A0MS01 117 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.91□□□□□ -1.14
HMGB4-201ENST00000425537 ODAMA1E959 279 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 SHISA9B4DS77 424 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 C12orf77C9JDV5 145 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 BCL2L11O43521 198 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 NDUFA2O43678 99 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 PGLYRP1O75594 196 aaPredicted RBP7.91□□□□□ -1.14
HMGB4-201ENST00000425537 SLC25A6P12236 298 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 EGR1P18146 543 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 VDAC1P21796 283 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 S100A10P60903 97 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 ADORA2A-AS1P86434 159 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 SRSF1Q07955 248 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMGB4-201ENST00000425537 EDDM3AQ14507 147 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 GNMTQ14749 295 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 CR1LQ2VPA4 569 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 SP6Q3SY56 376 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 TMEM268Q5VZI3 342 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 STUMQ69YW2 141 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 MEX3BQ6ZN04 569 aaKnown RBP7.91□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF645Q8N7E2 425 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 ANGPTL6Q8NI99 470 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 MRGPRDQ8TDS7 321 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 MSI2Q96DH6 328 aaKnown RBP7.91□□□□□ -1.14
HMGB4-201ENST00000425537 PHYHIPLQ96FC7 376 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 OR10C1Q96KK4 312 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 FAM210AQ96ND0 272 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 ARPC5LQ9BPX5 153 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 ZC4H2Q9NQZ6 224 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 OR1A1Q9P1Q5 309 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 JPT1Q9UK76 154 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 LAMP3Q9UQV4 416 aa7.91□□□□□ -1.14
HMGB4-201ENST00000425537 CHD3Q12873 2000 aaKnown RBP7.91□□□□□ -1.14
HMGB4-201ENST00000425537 PPIAL4EA0A075B759 164 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 IGKV1D-13A0A0B4J2D9 117 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 NKX2-6A6NCS4 301 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 E5RGE8 158 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 E7EQL1 145 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 PPIAL4DF5H284 164 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 ITGB1BP1O14713 200 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 ST8SIA3O43173 380 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF205O95201 554 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 OR8U9P0C7N5 309 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 PPIAL4FP0DN26 164 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 IGKV1-13P0DP09 117 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 CD80P33681 288 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 HTR2BP41595 481 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 GLIPR1P48060 266 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 RAB7AP51149 207 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 EDDM3BP56851 147 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms