RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 HSD17B6O14756 317 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 SLC25A17O43808 307 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 CST7O76096 145 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 TNFSF15O95150 251 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 APLNRP35414 380 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 FGF8P55075 233 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-205ENST00000425443 CLDN18P56856 261 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 PLEKHA2Q9HB19 425 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
COL12A1-205ENST00000425443 TRAV39A0A0B4J263 110 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 CDRT15L2A8MXV6 281 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 UMAD1C9J7I0 102 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 SSSCA1O60232 199 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 SEC11BP0C7V7 166 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 EPHA1P21709 976 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 TDGF1P3P51864 188 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 KIAA0141Q14154 515 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-205ENST00000425443 ODF3L1Q8IXM7 274 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 MMP24Q9Y5R2 645 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 POMT1Q9Y6A1 747 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 A0A1W2PN81 502 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 NKX2-6A6NCS4 301 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 H3BP45 60 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 M0R143 59 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 M0R296 226 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 GPR137BO60478 399 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 BCL3P20749 454 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 CHRNA7P36544 502 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 MYPOPQ86VE0 399 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-205ENST00000425443 LRP11Q86VZ4 500 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 ZDHHC23Q8IYP9 409 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 TMEM171Q8WVE6 324 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 APOBEC3DQ96AK3 386 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-205ENST00000425443 DEFB127Q9H1M4 99 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 DNAJC4Q9NNZ3 241 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 LAMA5O15230 3695 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 IGKV3D-15A0A087WSY6 115 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 ZNF732B4DXR9 585 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 TRAPPC2LH3BP13 241 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 KLRC4-KLRK1H3BQV0 150 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 SCTP09683 121 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 MEOX1P50221 254 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 SULT1A1P50225 295 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 HNF4GQ14541 408 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 ASCL4Q6XD76 172 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 CCDC71LQ8N9Z2 235 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 ZFP62Q8NB50 900 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-205ENST00000425443 OR4D5Q8NGN0 318 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 LINC00470Q9BZP3 86 aa11.11□□□□□ -0.63
COL12A1-205ENST00000425443 CHD3Q12873 2000 aaKnown RBP11.1□□□□□ -0.63
COL12A1-205ENST00000425443 BORCS7-ASMTA0A0B4J1R7 106 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 IGSF23A1L1A6 192 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 AHRRA9YTQ3 701 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 HS3ST1O14792 307 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 CNOT4O95628 575 aaKnown RBP11.1□□□□□ -0.63
COL12A1-205ENST00000425443 GAGE1Q13065 139 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 IZUMO4Q1ZYL8 232 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 KRTAP27-1Q3LI81 207 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 MKXQ8IYA7 352 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 IL1F10Q8WWZ1 152 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 C11orf1Q9H5F2 150 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 IL36GQ9NZH8 169 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 BDP1A6H8Y1 2624 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 ZNF705GA8MUZ8 300 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-205ENST00000425443 ST8SIA3O43173 380 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 NGFP01138 241 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 PPYP01298 95 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 MT-ND4LP03901 98 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 RAB5AP20339 215 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 GNRHRP30968 328 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 OR5I1Q13606 314 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 GNMTQ14749 295 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 SLC10A1Q14973 349 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 NRN1LQ496H8 165 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 GFI1BQ5VTD9 330 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 ZNF695Q8IW36 515 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 LRTM2Q8N967 370 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 RDH5Q92781 318 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 FER1L6-AS2Q96M78 137 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 KLF13Q9Y2Y9 288 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-205ENST00000425443 PUS1Q9Y606 427 aaKnown RBP eCLIP11.1□□□□□ -0.63
COL12A1-205ENST00000425443 ICE1Q9Y2F5 2266 aa11.1□□□□□ -0.63
COL12A1-205ENST00000425443 A0A1W2PNU3 283 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-205ENST00000425443 K7N7A8 449 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 CD59P13987 128 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 FABP4P15090 132 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 EWSR1Q01844 656 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL12A1-205ENST00000425443 HAGHQ16775 308 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 CXorf66Q5JRM2 361 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-205ENST00000425443 SPATA46Q5T0L3 261 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 TMEM211Q6ICI0 200 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 P4HA3Q7Z4N8 544 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 LGI3Q8N145 548 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 C17orf78Q8N4C9 275 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 MOB3AQ96BX8 217 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 BOD1Q96IK1 185 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 SPRY4Q9C004 299 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 ZNF724A8MTY0 619 aa11.09□□□□□ -0.63
COL12A1-205ENST00000425443 RPLP1P05386 114 aaKnown RBP11.09□□□□□ -0.63
COL12A1-205ENST00000425443 SP1P08047 785 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms