RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 JTBO76095 146 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 HLA-DRB1P01911 266 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 GLAP06280 429 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SPNP16150 400 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 PPIFP30405 207 aaKnown RBP9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ZNF137PP52743 207 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ACTBP60709 375 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 RIPK1Q13546 671 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SRSF7Q16629 238 aaKnown RBP eCLIP9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SLC22A6Q4U2R8 563 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ZNF660Q6AZW8 331 aaPredicted RBP9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ZNF554Q86TJ5 538 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 OR10V1Q8NGI7 309 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 GALMQ96C23 342 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 SLC7A6OSQ96CW6 309 aaPredicted RBP9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 LGALS12Q96DT0 336 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ISG20L2Q9H9L3 353 aaKnown RBP9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ERVK13-1Q9NX77 482 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ABRACLQ9P1F3 81 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 STEAP1Q9UHE8 339 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 PEX16Q9Y5Y5 336 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 TENM3Q9P273 2699 aa9.54□□□□□ -0.88
HLA-DQB3-203ENST00000425319 DNAH3Q8TD57 4116 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 A0A1W2PN81 502 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ZNF736B4DX44 427 aaPredicted RBP9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 H0Y980 276 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ATP6V0E1O15342 81 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 IGLV1-40P01703 118 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 HBZP02008 142 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 HSPB1P04792 205 aaKnown RBP9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 GSTP1P09211 210 aaKnown RBP9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 MC5RP33032 325 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 CHRNA7P36544 502 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 LSAMPQ13449 338 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 ZIK1Q3SY52 487 aaPredicted RBP9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 MORN2Q502X0 79 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 CT45A1Q5HYN5 189 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 RAB12Q6IQ22 244 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 OR4K15Q8NH41 348 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 CT45A3Q8NHU0 189 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 UBALD1Q8TB05 177 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 DLX4Q92988 240 aaPredicted RBP9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 KLK15Q9H2R5 256 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 TUBA4BQ9H853 241 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 GNB4Q9HAV0 340 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 JPT1Q9UK76 154 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 STUB1Q9UNE7 303 aa9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 FOXA2Q9Y261 457 aaPredicted RBP9.53□□□□□ -0.88
HLA-DQB3-203ENST00000425319 FAM90A10PA6NDY2 464 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 FAM90A7PA6NKC0 464 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 FAM90A23PA8MXZ1 464 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 C12orf77C9JDV5 145 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 G3V318 75 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 LGALS1P09382 135 aaKnown RBP9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 FUT3P21217 361 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ECSCRQ19T08 205 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 C5orf64Q2M2E5 130 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ZFAND6Q6FIF0 208 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ZNF529Q6P280 563 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ACSM6Q6P461 480 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 LYPD6Q86Y78 171 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MYOZ3Q8TDC0 251 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ZNF184Q99676 751 aaPredicted RBP9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 SPATA25Q9BR10 227 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ABHD14AQ9BUJ0 271 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 RSRP1Q9BUV0 290 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ANKRD60Q9BZ19 345 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 SLA2Q9H6Q3 261 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 TAF9BQ9HBM6 251 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 PIPOXQ9P0Z9 390 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 DSCAML1Q8TD84 2053 aa9.52□□□□□ -0.89
HLA-DQB3-203ENST00000425319 A0A0G2JLM5 398 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 HSPA12AO43301 675 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 YPEL1O60688 119 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MYL12AP19105 171 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ZP3P21754 424 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ALDH3A2P51648 485 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 GNB1P62873 340 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 C6orf141Q5SZD1 244 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 GTSCR1Q86UQ5 136 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 CDH26Q8IXH8 852 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 JAGN1Q8N5M9 183 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MINDY2Q8NBR6 621 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 OR2AK2Q8NG84 335 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 THRSPQ92748 146 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 NEDD4LQ96PU5 975 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 YPEL2Q96QA6 119 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 RANGRFQ9HD47 186 aaPredicted RBP9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ZNF355PQ9NSJ1 428 aa9.51□□□□□ -0.89
HLA-DQB3-203ENST00000425319 IGHV7-81A0A0B4J1V7 117 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 C13orf42A0A1B0GVH6 325 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 H7C2Y5 167 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 RAB29O14966 203 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 SLC31A2O15432 143 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 GPX5O75715 221 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 RBBP9O75884 186 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ALPLP05186 524 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 DCKP27707 260 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 BLVRBP30043 206 aaPredicted RBP9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ZNF134P52741 427 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms