RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 COMMD3Q9UBI1 195 aa12□□□□□ -0.49
TMEM248-204ENST00000424964 MGAT4AQ9UM21 535 aa12□□□□□ -0.49
TMEM248-204ENST00000424964 AMMECR1Q9Y4X0 333 aaPredicted RBP12□□□□□ -0.49
TMEM248-204ENST00000424964 TRAV18A0A075B6X5 111 aa11.99□□□□□ -0.49
TMEM248-204ENST00000424964 POM121CA8CG34 1229 aa11.99□□□□□ -0.49
TMEM248-204ENST00000424964 RNASE1P07998 156 aaKnown RBP11.99□□□□□ -0.49
TMEM248-204ENST00000424964 GSTP1P09211 210 aaKnown RBP11.99□□□□□ -0.49
TMEM248-204ENST00000424964 UBE2NLQ5JXB2 153 aa11.99□□□□□ -0.49
TMEM248-204ENST00000424964 C16orf87Q6PH81 154 aa11.99□□□□□ -0.49
TMEM248-204ENST00000424964 Q6ZPA2 131 aa11.99□□□□□ -0.49
TMEM248-204ENST00000424964 IZUMO1Q8IYV9 350 aa11.99□□□□□ -0.49
TMEM248-204ENST00000424964 OR52L2PQ8NGH6 319 aa11.99□□□□□ -0.49
TMEM248-204ENST00000424964 FAM216AQ8WUB2 273 aa11.99□□□□□ -0.49
TMEM248-204ENST00000424964 S100A16Q96FQ6 103 aaKnown RBP11.99□□□□□ -0.49
TMEM248-204ENST00000424964 BCL7BQ9BQE9 202 aa11.99□□□□□ -0.49
TMEM248-204ENST00000424964 CHIAQ9BZP6 476 aa11.99□□□□□ -0.49
TMEM248-204ENST00000424964 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.99□□□□□ -0.493e-6■■■□□ 17.1
TMEM248-204ENST00000424964 ABCB10Q9NRK6 738 aa11.99□□□□□ -0.49
TMEM248-204ENST00000424964 ELF5Q9UKW6 265 aaPredicted RBP11.99□□□□□ -0.49
TMEM248-204ENST00000424964 A0A0A6YYH2 397 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 TMEM235A6NFC5 223 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 A6NJ64 397 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 H3BUX3 64 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 FCGR3AP08637 254 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 ZNF182P17025 639 aaPredicted RBP11.98□□□□□ -0.49
TMEM248-204ENST00000424964 GNG2P59768 71 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 HLA-DRB3P79483 266 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 HTD2P86397 168 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 GNMTQ14749 295 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 SPCS2Q15005 226 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 ZNF260Q3ZCT1 412 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 MORN2Q502X0 79 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 TPTE2P1Q5T6R2 138 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 HACD4Q5VWC8 232 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.98□□□□□ -0.49
TMEM248-204ENST00000424964 OR5R1Q8NH85 324 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 ACOT12Q8WYK0 555 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 RPEQ96AT9 228 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 MDFIQ99750 246 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 C19orf24Q9BVV8 132 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 ABCG5Q9H222 651 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 ZNF230Q9UIE0 474 aaPredicted RBP11.98□□□□□ -0.49
TMEM248-204ENST00000424964 JPT1Q9UK76 154 aa11.98□□□□□ -0.49
TMEM248-204ENST00000424964 ATRQ13535 2644 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 CCDC160A6NGH7 325 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 TRDCB7Z8K6 153 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 HSPA12AO43301 675 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 RGS11O94810 467 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 CRYBA1P05813 215 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 SCTP09683 121 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 SOX6P35712 828 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 PPP1CCP36873 323 aaKnown RBP11.97□□□□□ -0.49
TMEM248-204ENST00000424964 RAB13P51153 203 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 ARHGDIBP52566 201 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 ACTG1P63261 375 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 PITPNAQ00169 270 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 MADCAM1Q13477 382 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 LY6EQ16553 131 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 AANATQ16613 207 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 PNLIPRP3Q17RR3 467 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 Q3ZCU0 254 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 MZT2AQ6P582 158 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 DTX3Q8N9I9 347 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 MAFIPQ8WZ33 124 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 AP3S1Q92572 193 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 TOMM40LQ969M1 308 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 VPREB3Q9UKI3 123 aa11.97□□□□□ -0.49
TMEM248-204ENST00000424964 FAM181BA6NEQ2 426 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 VGLL3A8MV65 326 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 LY6LH3BQJ8 138 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 SLC31A2O15432 143 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 GPR137BO60478 399 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 YPEL1O60688 119 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 IL3RAP26951 378 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 MNDAP41218 407 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 KIR2DS4P43632 304 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 KIR2DS1Q14954 304 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 CT45A1Q5HYN5 189 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 STEAP3Q658P3 488 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 CCDC144NLQ6NUI1 221 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 SLC25A48Q6ZT89 311 aaKnown RBP11.96□□□□□ -0.49
TMEM248-204ENST00000424964 LINC00311Q8N616 119 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 C8orf31Q8N9H6 132 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 CT45A3Q8NHU0 189 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 NUDCD2Q8WVJ2 157 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 ISOC1Q96CN7 298 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 YPEL2Q96QA6 119 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 OCSTAMPQ9BR26 566 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 ST6GALNAC5Q9BVH7 336 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 SLC23A1Q9UHI7 598 aa11.96□□□□□ -0.49
TMEM248-204ENST00000424964 OOSP1A8MZH6 123 aa11.95□□□□□ -0.5
TMEM248-204ENST00000424964 H3BMQ9 156 aa11.95□□□□□ -0.5
TMEM248-204ENST00000424964 FABP7O15540 132 aa11.95□□□□□ -0.5
TMEM248-204ENST00000424964 XRCC3O43542 346 aa11.95□□□□□ -0.5
TMEM248-204ENST00000424964 HPGDSO60760 199 aa11.95□□□□□ -0.5
TMEM248-204ENST00000424964 EIF4EP06730 217 aaKnown RBP11.95□□□□□ -0.5
TMEM248-204ENST00000424964 GSTT2P0CG29 244 aa11.95□□□□□ -0.5
TMEM248-204ENST00000424964 GSTT2BP0CG30 244 aa11.95□□□□□ -0.5
TMEM248-204ENST00000424964 DTYMKP23919 212 aa11.95□□□□□ -0.5
TMEM248-204ENST00000424964 ZBTB25P24278 435 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms