RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 RUSC1-AS1Q66K80 236 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 ZNF626Q68DY1 528 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 FAM53AQ6NSI3 398 aaPredicted RBP13.84□□□□□ -0.19
COL7A1-202ENST00000422991 BRD3OSQ6XYD6 125 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 CCDC190Q86UF4 302 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 ABHD12Q8N2K0 398 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 GVQW1Q8N7I0 195 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 OR4A4PQ8NGN8 299 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 C15orf40Q8WUR7 153 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 IL1F10Q8WWZ1 152 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 CABLES2Q9BTV7 478 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 ST6GALNAC5Q9BVH7 336 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 PTTG2Q9NZH5 202 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 GNG12Q9UBI6 72 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 JPT1Q9UK76 154 aa13.84□□□□□ -0.19
COL7A1-202ENST00000422991 A0A1W2PRD5 423 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 A0A1W2PRF3 423 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 A0A1W2PRM7 423 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 SULT1C2O00338 296 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 NPFFO15130 113 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 DIRAS3O95661 229 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 GSTT2P0CG29 244 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 GSTT2BP0CG30 244 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 EPHA1P21709 976 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 IL18Q14116 193 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 Q3ZCU0 254 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 STEAP3Q658P3 488 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 PYHIN1Q6K0P9 492 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 C9orf139Q6ZV77 190 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 HOGA1Q86XE5 327 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 PIP4P2Q8N4L2 257 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 OR52L2PQ8NGH6 319 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 OR10V1Q8NGI7 309 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 SNAPC3Q92966 411 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 LEAP2Q969E1 77 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 IFT46Q9NQC8 304 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 OR2S2Q9NQN1 319 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 ZNF69Q9UC07 566 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 V9GYH0 126 aa13.83□□□□□ -0.2
COL7A1-202ENST00000422991 FABP12A6NFH5 140 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 IGLV1-47P01700 117 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 IGHV3-7P01780 117 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 SRD5A1P18405 259 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 SAA4P35542 130 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 PPP1CCP36873 323 aaKnown RBP13.82□□□□□ -0.2
COL7A1-202ENST00000422991 MRPS10P82664 201 aaKnown RBP13.82□□□□□ -0.2
COL7A1-202ENST00000422991 MIDNQ504T8 468 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 ZNF439Q8NDP4 499 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 BEST4Q8NFU0 473 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 OR9G1Q8NH87 305 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 OR1A1Q9P1Q5 309 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 ANXA10Q9UJ72 324 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 PSG11Q9UQ72 335 aa13.82□□□□□ -0.2
COL7A1-202ENST00000422991 CTDSPLO15194 276 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 ARG1P05089 322 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 NAT1P18440 290 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 ETV6P41212 452 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 GNG10P50151 68 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 DGCR2P98153 550 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 MORN2Q502X0 79 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 IGSF11Q5DX21 431 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 RNASE12Q5GAN4 147 aaKnown RBP13.81□□□□□ -0.2
COL7A1-202ENST00000422991 LY6G6FQ5SQ64 297 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 FAM131AQ6UXB0 335 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 C8orf31Q8N9H6 132 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 BEND2Q8NDZ0 799 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 OR4P4Q8NGL7 312 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 OR52I2Q8NH67 350 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 SMIM4Q8WVI0 70 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 MS4A7Q9GZW8 240 aaPredicted RBP13.81□□□□□ -0.2
COL7A1-202ENST00000422991 SLC23A1Q9UHI7 598 aa13.81□□□□□ -0.2
COL7A1-202ENST00000422991 GABARAPH6UMI1 98 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 J3QR06 171 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 BET1O15155 118 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 YPEL1O60688 119 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 FCER2P06734 321 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 ZBTB25P24278 435 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 RCVRNP35243 200 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 SCGB2A2Q13296 93 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 ZNF79Q15937 498 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 TUSC1Q2TAM9 212 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 HLA-DRB5Q30154 266 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 SPANXN2Q5MJ10 180 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 LINC00311Q8N616 119 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 ZNF596Q8TC21 504 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 AJUBAQ96IF1 538 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 YPEL2Q96QA6 119 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 MMP28Q9H239 520 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 ZNRD1Q9P1U0 126 aa13.8□□□□□ -0.2
COL7A1-202ENST00000422991 TBL2Q9Y4P3 447 aaKnown RBP13.8□□□□□ -0.2
COL7A1-202ENST00000422991 SOX21Q9Y651 276 aaPredicted RBP13.8□□□□□ -0.2
COL7A1-202ENST00000422991 TRBV6-7A0A0A0MS04 114 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 A0A0U1RQK1 487 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 A0A1W2PPE3 182 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 TOR1AO14656 332 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 SLC31A2O15432 143 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 HSPA12AO43301 675 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 RGS11O94810 467 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 FAM157CP0CG43 387 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 PTBP1P26599 531 aaKnown RBP eCLIP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms