RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 LANCL1O43813 399 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 CD1AP06126 327 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 MGMTP16455 207 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 VHLP40337 213 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 ZNF134P52741 427 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 CFHR3Q02985 330 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 CD69Q07108 199 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 ST3GAL4Q11206 333 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 DOC2BQ14184 412 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 KIR2DS1Q14954 304 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 NKAIN3Q8N8D7 197 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 GGHQ92820 318 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 Q96M66 194 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 DERL3Q96Q80 235 aa13.62□□□□□ -0.23
MSH6-203ENST00000420813 MBNL3Q9NUK0 354 aaKnown RBP13.62□□□□□ -0.23
MSH6-203ENST00000420813 CNOT2Q9NZN8 540 aaKnown RBP13.62□□□□□ -0.23
MSH6-203ENST00000420813 EFCAB10A6NFE3 127 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 RAMP3O60896 148 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 IGHG4P01861 327 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 IGF1P05019 195 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 RCC1P18754 421 aaPredicted RBP13.61□□□□□ -0.23
MSH6-203ENST00000420813 FUT3P21217 361 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 SOX6P35712 828 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 CAPGP40121 348 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 ADARB1P78563 741 aaKnown RBP13.61□□□□□ -0.23
MSH6-203ENST00000420813 DGCR2P98153 550 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 LSAMPQ13449 338 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 PRR18Q8N4B5 295 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 DHRSXQ8N5I4 330 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 OR10V1Q8NGI7 309 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 OR1L1Q8NH94 360 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 DUX3Q96PT4 197 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 HSPB9Q9BQS6 159 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 UQCC2Q9BRT2 126 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 SELENOIQ9C0D9 397 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 BANF2Q9H503 90 aa13.61□□□□□ -0.23
MSH6-203ENST00000420813 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.61□□□□□ -0.23
MSH6-203ENST00000420813 A0A1W2PPK0 400 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 CRTAPO75718 401 aaPredicted RBP13.6□□□□□ -0.23
MSH6-203ENST00000420813 MAS1P04201 325 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 OR5H8P0DN80 308 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 VDAC1P21796 283 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 MAPK3P27361 379 aaPredicted RBP13.6□□□□□ -0.23
MSH6-203ENST00000420813 F2RL1P55085 397 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 LRRC36Q1X8D7 754 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 MORN2Q502X0 79 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 SIGIRRQ6IA17 410 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 OR5M8Q8NGP6 311 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 CHCHD6Q9BRQ6 235 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 TAF9BQ9HBM6 251 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 OR2S2Q9NQN1 319 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 KCNIP1Q9NZI2 227 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 GHRLQ9UBU3 117 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 JPT1Q9UK76 154 aa13.6□□□□□ -0.23
MSH6-203ENST00000420813 TENM3Q9P273 2699 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 PNMA8CA0A1B0GUJ8 204 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 PDCD6O75340 191 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 CELP19835 753 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 PSMB8P28062 276 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 WNT4P56705 351 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 RAB25P57735 213 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 RCN1Q15293 331 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 LY6G6FQ5SQ64 297 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 C4orf3Q8WVX3 66 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 CST11Q9H112 138 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 NBEAL2Q6ZNJ1 2754 aa13.59□□□□□ -0.23
MSH6-203ENST00000420813 KMT2CQ8NEZ4 4911 aaKnown RBP13.58□□□□□ -0.24
MSH6-203ENST00000420813 SORL1Q92673 2214 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 UBE2QL1A1L167 161 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 MYL12BO14950 172 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 HTD2P86397 168 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 DEFB136Q30KP8 78 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 C9orf66Q5T8R8 295 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 LCNL1Q6ZST4 164 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 MRPL30Q8TCC3 161 aaKnown RBP13.58□□□□□ -0.24
MSH6-203ENST00000420813 MYOZ3Q8TDC0 251 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 TFAP2CQ92754 450 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 KCTD7Q96MP8 289 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 ABHD14AQ9BUJ0 271 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 PLCXD1Q9NUJ7 323 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 PSORS1C1Q9UIG5 152 aa13.58□□□□□ -0.24
MSH6-203ENST00000420813 ZNF107Q9UII5 783 aaPredicted RBP13.58□□□□□ -0.24
MSH6-203ENST00000420813 YPEL1O60688 119 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 RGS11O94810 467 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 UBBP0CG47 229 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 FHL3Q13643 280 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 GNMTQ14749 295 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 MMDQ15546 238 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 C6orf141Q5SZD1 244 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 LAIR2Q6ISS4 152 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 ODF3L1Q8IXM7 274 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 C8orf59Q8N0T1 100 aaPredicted RBP13.57□□□□□ -0.24
MSH6-203ENST00000420813 WWC2-AS2Q96NR7 200 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 YPEL2Q96QA6 119 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 LRRC42Q9Y546 428 aa13.57□□□□□ -0.24
MSH6-203ENST00000420813 SLC2A2P11168 524 aaPredicted RBP13.56□□□□□ -0.24
MSH6-203ENST00000420813 LUMP51884 338 aaPredicted RBP13.56□□□□□ -0.24
MSH6-203ENST00000420813 AHSA2Q719I0 299 aa13.56□□□□□ -0.24
MSH6-203ENST00000420813 NANOGP1Q8N7R0 232 aa13.56□□□□□ -0.24
MSH6-203ENST00000420813 OR52L2PQ8NGH6 319 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms