RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 HNF4GQ14541 408 aa12.21□□□□□ -0.45
NUP50-204ENST00000417702 ZNF554Q86TJ5 538 aa12.21□□□□□ -0.45
NUP50-204ENST00000417702 LYG1Q8N1E2 194 aa12.21□□□□□ -0.45
NUP50-204ENST00000417702 OR5AU1Q8NGC0 362 aa12.21□□□□□ -0.45
NUP50-204ENST00000417702 OR10V1Q8NGI7 309 aa12.21□□□□□ -0.45
NUP50-204ENST00000417702 CITED2Q99967 270 aaPredicted RBP12.21□□□□□ -0.45
NUP50-204ENST00000417702 A0A087WXM4 84 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 SH2D7A6NKC9 451 aaPredicted RBP12.2□□□□□ -0.46
NUP50-204ENST00000417702 TMEM14DPA8MWL7 114 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 OPN1MWP04001 364 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 AMY1AP04745 511 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 AMY2AP04746 511 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 OPN1MW2P0DN77 364 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 OPN1MW3P0DN78 364 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 CHATP28329 748 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 STEAP3Q658P3 488 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 FAM53AQ6NSI3 398 aaPredicted RBP12.2□□□□□ -0.46
NUP50-204ENST00000417702 SLC25A48Q6ZT89 311 aaKnown RBP12.2□□□□□ -0.46
NUP50-204ENST00000417702 TSPAN14Q8NG11 270 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 OR4F17Q8NGA8 305 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 MRPL30Q8TCC3 161 aaKnown RBP12.2□□□□□ -0.46
NUP50-204ENST00000417702 OR4F4Q96R69 305 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 URM1Q9BTM9 101 aaKnown RBP12.2□□□□□ -0.46
NUP50-204ENST00000417702 TM2D1Q9BX74 207 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 VCX3AQ9NNX9 186 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 OR2S2Q9NQN1 319 aa12.2□□□□□ -0.46
NUP50-204ENST00000417702 MBNL3Q9NUK0 354 aaKnown RBP12.2□□□□□ -0.46
NUP50-204ENST00000417702 AK6Q9Y3D8 172 aaKnown RBP12.2□□□□□ -0.46
NUP50-204ENST00000417702 VWFP04275 2813 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 TRDV1A0A1B0GX56 115 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 SLC17A2O00624 439 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 FGF16O43320 207 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 TXNL1O43396 289 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 KCNAB3O43448 404 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 ARSBP15848 533 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 GALP22466 123 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 CALRP27797 417 aaKnown RBP12.19□□□□□ -0.46
NUP50-204ENST00000417702 BLVRBP30043 206 aaPredicted RBP12.19□□□□□ -0.46
NUP50-204ENST00000417702 PSMD7P51665 324 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 UNC119Q13432 240 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 P2RY14Q15391 338 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 NEDD8Q15843 81 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 RAB11BQ15907 218 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 OR2W3Q7Z3T1 314 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 C6orf201Q7Z4U5 140 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 R3HDM4Q96D70 268 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 SULT4A1Q9BR01 284 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 FAAP24Q9BTP7 215 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 KCNK15Q9H427 330 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 CHMP1AQ9HD42 196 aaPredicted RBP12.19□□□□□ -0.46
NUP50-204ENST00000417702 PLEKHJ1Q9NW61 149 aa12.19□□□□□ -0.46
NUP50-204ENST00000417702 IGHV3-72A0A0B4J1Y9 119 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 SLC31A2O15432 143 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 RGS11O94810 467 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 QRFPP83859 136 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 CD83Q01151 205 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 EBI3Q14213 229 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 CT45A1Q5HYN5 189 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 CD200R1LQ6Q8B3 271 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 TGIF2LXQ8IUE1 241 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 IZUMO1Q8IYV9 350 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 C5orf56Q8N8D9 126 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 ZNF439Q8NDP4 499 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 OR4X2Q8NGF9 303 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 OR2T10Q8NGZ9 312 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 CT45A3Q8NHU0 189 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 RTN4IP1Q8WWV3 396 aaPredicted RBP12.18□□□□□ -0.46
NUP50-204ENST00000417702 ST6GALNAC6Q969X2 333 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 GALMQ96C23 342 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 GFI1Q99684 422 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 NICN1Q9BSH3 213 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 ABRACLQ9P1F3 81 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 JPT1Q9UK76 154 aa12.18□□□□□ -0.46
NUP50-204ENST00000417702 TCRBV4S1A1TA0A5B7 111 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 NCBP2LA6PVI3 153 aaKnown RBP12.17□□□□□ -0.46
NUP50-204ENST00000417702 PDCD5O14737 125 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 MYL9P24844 172 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 CD1BP29016 333 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 ZNF134P52741 427 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 ZNF137PP52743 207 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 HTD2P86397 168 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 MORN2Q502X0 79 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 OR52L2PQ8NGH6 319 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 CYYR1Q96J86 154 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 EAF1Q96JC9 268 aaPredicted RBP12.17□□□□□ -0.46
NUP50-204ENST00000417702 LPAR5Q9H1C0 372 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 RIMS4Q9H426 269 aaPredicted RBP12.17□□□□□ -0.46
NUP50-204ENST00000417702 STUB1Q9UNE7 303 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 V9GY05 133 aa12.17□□□□□ -0.46
NUP50-204ENST00000417702 TRAV1-2A0A0B4J238 106 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 A0A1W2PRX2 142 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 YPEL1O60688 119 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 MOSP00540 346 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 PPP1CCP36873 323 aaKnown RBP12.16□□□□□ -0.46
NUP50-204ENST00000417702 HMGN3Q15651 99 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 MOB1BQ7L9L4 216 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 C1QL4Q86Z23 238 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 OR51D1Q8NGF3 324 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 SETD6Q8TBK2 473 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 FAM3DQ96BQ1 224 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms