RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	CEACAM3	P40198	252 aa		13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	RBM39	Q14498	530 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	HLA-DRB5	Q30154	266 aa		13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	FOXB2	Q5VYV0	432 aa		13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	SAMD12	Q8N8I0	201 aa		13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	OR10A7	Q8NGE5	316 aa		13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	OR10R2	Q8NGX6	335 aa		13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	KCTD12	Q96CX2	325 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	PLEKHJ1	Q9NW61	149 aa		13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	ETAA1	Q9NY74	926 aa		13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	COMMD3	Q9UBI1	195 aa		13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	KIAA2026	Q5HYC2	2103 aa		13.17	□□□□□ -0.3
DDR1-231	ENST00000417521	BUB1B-PAK6	H3BSN5	160 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	GLA	P06280	429 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	ARHGDIB	P52566	201 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	ZNF497	Q6ZNH5	498 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521		Q6ZTK2	550 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	OR9G1	Q8NH87	305 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	MRGPRD	Q8TDS7	321 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	RAB3C	Q96E17	227 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	PECR	Q9BY49	303 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	IDI2-AS1	Q9NZ38	188 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	KCNK7	Q9Y2U2	307 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	SIGLEC9	Q9Y336	463 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521		A0A075B6Q4	140 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	TMEM30CP	A0ZSE6	113 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	FAM172BP	A6NC97	362 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	ZNF701	M0R085	212 aa	Predicted RBP	13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	MT-ND4	P03905	459 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	NFYB	P25208	207 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	BRS3	P32247	399 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	SOX6	P35712	828 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	TMEM219	Q86XT9	240 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521		Q8N2B8	174 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	CCDC107	Q8WV48	283 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	ACOT12	Q8WYK0	555 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	AP3S1	Q92572	193 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	DCUN1D5	Q9BTE7	237 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	CCDC59	Q9P031	241 aa	Known RBP	13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	AK3	Q9UIJ7	227 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	HSF4	Q9ULV5	492 aa		13.16	□□□□□ -0.3
DDR1-231	ENST00000417521	OOSP1	A8MZH6	123 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	LY6L	H3BQJ8	138 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	HPGDS	O60760	199 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	GNB3	P16520	340 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	UBE2NL	Q5JXB2	153 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	TPTE2P1	Q5T6R2	138 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	OR4K15	Q8NH41	348 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	RFESD	Q8TAC1	157 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	DGCR14	Q96DF8	476 aa	Known RBP	13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	PRSS22	Q9GZN4	317 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	MMP28	Q9H239	520 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	ZNF702P	Q9H963	129 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521	NDUFA13	Q9P0J0	144 aa		13.15	□□□□□ -0.3
DDR1-231	ENST00000417521		J3QR06	171 aa		13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	EIF4E	P06730	217 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	HIST1H1D	P16402	221 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	HERPUD1	Q15011	391 aa		13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	UTF1	Q5T230	341 aa		13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	CCDC144NL	Q6NUI1	221 aa		13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	C16orf82	Q7Z2V1	217 aa		13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	MRPL30	Q8TCC3	161 aa	Known RBP	13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	ABCG5	Q9H222	651 aa		13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	ELF5	Q9UKW6	265 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	PSG11	Q9UQ72	335 aa		13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.14	□□□□□ -0.31
DDR1-231	ENST00000417521	MFNG	O00587	321 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	ORC5	O43913	435 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	SSTR5	P35346	364 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	MNDA	P41218	407 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	MZT2A	Q6P582	158 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521		Q6ZPA2	131 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	IZUMO1	Q8IYV9	350 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	GAPT	Q8N292	157 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	PHF21A	Q96BD5	680 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	AKR1E2	Q96JD6	320 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	SLIRP	Q9GZT3	109 aa	Known RBP	13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	MMP27	Q9H306	513 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	TRAPPC2L	Q9UL33	140 aa		13.13	□□□□□ -0.31
DDR1-231	ENST00000417521	TRAV18	A0A075B6X5	111 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521		A6NHS1	94 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	C15orf65	H3BRN8	121 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	CA11	O75493	328 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	RCC1	P18754	421 aa	Predicted RBP	13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	ELK1	P19419	428 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	CDNF	Q49AH0	187 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	KLHDC1	Q8N7A1	406 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	OR52M1	Q8NGK5	317 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	UBALD1	Q8TB05	177 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	CFHR4	Q92496	578 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	ARL11	Q969Q4	196 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	S100A16	Q96FQ6	103 aa	Known RBP	13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	SERTAD4	Q9NUC0	356 aa		13.12	□□□□□ -0.31
DDR1-231	ENST00000417521	CTDSP2	O14595	271 aa		13.11	□□□□□ -0.31
DDR1-231	ENST00000417521	SCGN	O76038	276 aa		13.11	□□□□□ -0.31
DDR1-231	ENST00000417521	NAPSA	O96009	420 aa		13.11	□□□□□ -0.31
DDR1-231	ENST00000417521	APOA1	P02647	267 aa		13.11	□□□□□ -0.31
DDR1-231	ENST00000417521	BLCAP	P62952	87 aa		13.11	□□□□□ -0.31

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