RNA–Protein interactions for RNA: ENST00000417066.5

CCDC148-204, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,447 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-204ENST00000417066 ZNF439Q8NDP4 499 aa15.33■□□□□ 0.04
CCDC148-204ENST00000417066 CT45A3Q8NHU0 189 aa15.33■□□□□ 0.04
CCDC148-204ENST00000417066 YIPF6Q96EC8 236 aa15.33■□□□□ 0.04
CCDC148-204ENST00000417066 VCX3AQ9NNX9 186 aa15.33■□□□□ 0.04
CCDC148-204ENST00000417066 RAB18Q9NP72 206 aa15.33■□□□□ 0.04
CCDC148-204ENST00000417066 PITPNC1Q9UKF7 332 aa15.33■□□□□ 0.04
CCDC148-204ENST00000417066 TRIM64CA6NLI5 447 aa15.32■□□□□ 0.04
CCDC148-204ENST00000417066 SNRPBP14678 240 aaKnown RBP15.32■□□□□ 0.04
CCDC148-204ENST00000417066 BRS3P32247 399 aa15.32■□□□□ 0.04
CCDC148-204ENST00000417066 PPP1CCP36873 323 aaKnown RBP15.32■□□□□ 0.04
CCDC148-204ENST00000417066 RANBP1P43487 201 aa15.32■□□□□ 0.04
CCDC148-204ENST00000417066 REG1BP48304 166 aa15.32■□□□□ 0.04
CCDC148-204ENST00000417066 PROK1P58294 105 aa15.32■□□□□ 0.04
CCDC148-204ENST00000417066 HABP2Q14520 560 aaPredicted RBP15.32■□□□□ 0.04
CCDC148-204ENST00000417066 HMGN3Q15651 99 aa15.32■□□□□ 0.04
CCDC148-204ENST00000417066 MORN2Q502X0 79 aa15.32■□□□□ 0.04
CCDC148-204ENST00000417066 SFXN4Q6P4A7 337 aa15.32■□□□□ 0.04
CCDC148-204ENST00000417066 ZNF880Q6PDB4 577 aa15.32■□□□□ 0.04
CCDC148-204ENST00000417066 LIAT1Q6ZQX7 453 aa15.32■□□□□ 0.04
CCDC148-204ENST00000417066 WFDC12Q8WWY7 111 aa15.32■□□□□ 0.04
CCDC148-204ENST00000417066 A0A1W2PPI3 338 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 OOSP1A8MZH6 123 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 RAB27BO00194 218 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 TIMM23O14925 209 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 RAB6AP20340 208 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 LSM3P62310 102 aaKnown RBP15.31■□□□□ 0.04
CCDC148-204ENST00000417066 BLCAPP62952 87 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 CCDC144NLQ6NUI1 221 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 SHISA2Q6UWI4 295 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 Q6ZS46 218 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 LINC00311Q8N616 119 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 DRAM1Q8N682 238 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 OR10R2Q8NGX6 335 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 OR56B4Q8NH76 319 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 IL1F10Q8WWZ1 152 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 GALMQ96C23 342 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 RAB3CQ96E17 227 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 CMSS1Q9BQ75 279 aaKnown RBP15.31■□□□□ 0.04
CCDC148-204ENST00000417066 OCSTAMPQ9BR26 566 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 NPFFR1Q9GZQ6 430 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 ATG5Q9H1Y0 275 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 RAB9BQ9NP90 201 aa15.31■□□□□ 0.04
CCDC148-204ENST00000417066 A0A075B6Q4 140 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 TRBV6-6A0A0A6YYG2 114 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 HSD17B6O14756 317 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 AIREO43918 545 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 SMIM18P0DKX4 95 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 GNB3P16520 340 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 MNDAP41218 407 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 ARHGDIBP52566 201 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 SLC25A48Q6ZT89 311 aaKnown RBP15.3■□□□□ 0.04
CCDC148-204ENST00000417066 ZNF554Q86TJ5 538 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 C8orf31Q8N9H6 132 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 OR4C13Q8NGP0 309 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 CAPSLQ8WWF8 208 aa15.3■□□□□ 0.04
CCDC148-204ENST00000417066 RBMXL1Q96E39 390 aaKnown RBP15.3■□□□□ 0.04
CCDC148-204ENST00000417066 KIR2DS4P43632 304 aa15.29■□□□□ 0.04
CCDC148-204ENST00000417066 HTD2P86397 168 aa15.29■□□□□ 0.04
CCDC148-204ENST00000417066 TMEM30BQ3MIR4 351 aa15.29■□□□□ 0.04
CCDC148-204ENST00000417066 CFHR4Q92496 578 aa15.29■□□□□ 0.04
CCDC148-204ENST00000417066 ST6GALNAC6Q969X2 333 aa15.29■□□□□ 0.04
CCDC148-204ENST00000417066 PTX4Q96A99 478 aa15.29■□□□□ 0.04
CCDC148-204ENST00000417066 RIMS4Q9H426 269 aaPredicted RBP15.29■□□□□ 0.04
CCDC148-204ENST00000417066 ZNF702PQ9H963 129 aa15.29■□□□□ 0.04
CCDC148-204ENST00000417066 Q9N2K0 584 aa15.29■□□□□ 0.04
CCDC148-204ENST00000417066 C12orf4Q9NQ89 552 aa15.29■□□□□ 0.04
CCDC148-204ENST00000417066 JPT1Q9UK76 154 aa15.29■□□□□ 0.04
CCDC148-204ENST00000417066 ELF5Q9UKW6 265 aaPredicted RBP15.29■□□□□ 0.04
CCDC148-204ENST00000417066 IGHV3-72A0A0B4J1Y9 119 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 METTL21EPA6NDL7 271 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 FAM90A9PA6NNJ1 464 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 SNRNP70P08621 437 aaKnown RBP15.28■□□□□ 0.04
CCDC148-204ENST00000417066 SCTP09683 121 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 RAB7AP51149 207 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 TIMM50Q3ZCQ8 353 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 Q3ZCU0 254 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 IDNKQ5T6J7 187 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 MOB3BQ86TA1 216 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 LGALS14Q8TCE9 139 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 SLC25A33Q9BSK2 321 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 RANBP3Q9H6Z4 567 aaPredicted RBP15.28■□□□□ 0.04
CCDC148-204ENST00000417066 ABRACLQ9P1F3 81 aa15.28■□□□□ 0.04
CCDC148-204ENST00000417066 IGHV1-3A0A0C4DH29 117 aa15.27■□□□□ 0.04
CCDC148-204ENST00000417066 MFNGO00587 321 aa15.27■□□□□ 0.04
CCDC148-204ENST00000417066 GAPDHP04406 335 aaKnown RBP15.27■□□□□ 0.04
CCDC148-204ENST00000417066 FAM106CPP0CH98 169 aa15.27■□□□□ 0.04
CCDC148-204ENST00000417066 ZNF816Q0VGE8 651 aaPredicted RBP15.27■□□□□ 0.04
CCDC148-204ENST00000417066 HNF4GQ14541 408 aa15.27■□□□□ 0.04
CCDC148-204ENST00000417066 MOB1BQ7L9L4 216 aa15.27■□□□□ 0.04
CCDC148-204ENST00000417066 OR8H3Q8N146 312 aa15.27■□□□□ 0.04
CCDC148-204ENST00000417066 LYG1Q8N1E2 194 aa15.27■□□□□ 0.04
CCDC148-204ENST00000417066 OR5H6Q8NGV6 325 aa15.27■□□□□ 0.04
CCDC148-204ENST00000417066 SH2D7A6NKC9 451 aaPredicted RBP15.26■□□□□ 0.03
CCDC148-204ENST00000417066 YPEL1O60688 119 aa15.26■□□□□ 0.03
CCDC148-204ENST00000417066 CD3GP09693 182 aa15.26■□□□□ 0.03
CCDC148-204ENST00000417066 HIST1H1DP16402 221 aaKnown RBP15.26■□□□□ 0.03
CCDC148-204ENST00000417066 HLA-DRB3P79483 266 aa15.26■□□□□ 0.03
CCDC148-204ENST00000417066 HIST2H2BDQ6DRA6 164 aa15.26■□□□□ 0.03
CCDC148-204ENST00000417066 OR2T6Q8NHC8 308 aa15.26■□□□□ 0.03
CCDC148-204ENST00000417066 RTN4IP1Q8WWV3 396 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms