RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 CCR6P51684 374 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 MEF2CQ06413 473 aaPredicted RBP16.63■□□□□ 0.25
PTPRU-203ENST00000415600 BATF2Q8N1L9 274 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 TMEM229BQ8NBD8 167 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 OR10K1Q8NGX5 313 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 OR2T6Q8NHC8 308 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 PPP1R35Q8TAP8 253 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 EMG1Q92979 244 aaKnown RBP16.63■□□□□ 0.25
PTPRU-203ENST00000415600 SLAMF9Q96A28 289 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 SNX22Q96L94 193 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 NPFFR1Q9GZQ6 430 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 ELF5Q9UKW6 265 aaPredicted RBP16.63■□□□□ 0.25
PTPRU-203ENST00000415600 TBL2Q9Y4P3 447 aaKnown RBP16.63■□□□□ 0.25
PTPRU-203ENST00000415600 WNK1Q9H4A3 2382 aa16.63■□□□□ 0.25
PTPRU-203ENST00000415600 hADV38S2A0JD32 116 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 FOXI3A8MTJ6 420 aaPredicted RBP16.62■□□□□ 0.25
PTPRU-203ENST00000415600 SOCS1O15524 211 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 ZNF780AO75290 641 aaPredicted RBP16.62■□□□□ 0.25
PTPRU-203ENST00000415600 DHFRP00374 187 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 ZNF728P0DKX0 622 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 GTF2F2P13984 249 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 HIST1H1DP16402 221 aaKnown RBP16.62■□□□□ 0.25
PTPRU-203ENST00000415600 TMEM50BP56557 158 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 TAS2R19P59542 299 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 SLC35E4Q6ICL7 350 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 AKAP14Q86UN6 197 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 OR51T1Q8NGJ9 327 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 RAB3CQ96E17 227 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 SEBOXQ9HB31 216 aaPredicted RBP16.62■□□□□ 0.25
PTPRU-203ENST00000415600 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.62■□□□□ 0.25
PTPRU-203ENST00000415600 NUDT15Q9NV35 164 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 IL36GQ9NZH8 169 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 MTCH1Q9NZJ7 389 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 ALG5Q9Y673 324 aa16.62■□□□□ 0.25
PTPRU-203ENST00000415600 BOLA2-SMG1P6H3BVE0 249 aa16.61■□□□□ 0.25
PTPRU-203ENST00000415600 GNB3P16520 340 aa16.61■□□□□ 0.25
PTPRU-203ENST00000415600 CCL3L1P16619 93 aa16.61■□□□□ 0.25
PTPRU-203ENST00000415600 RCVRNP35243 200 aa16.61■□□□□ 0.25
PTPRU-203ENST00000415600 DEFA6Q01524 100 aa16.61■□□□□ 0.25
PTPRU-203ENST00000415600 PDZK1IP1Q13113 114 aa16.61■□□□□ 0.25
PTPRU-203ENST00000415600 ZNF273Q14593 569 aa16.61■□□□□ 0.25
PTPRU-203ENST00000415600 PNLIPRP3Q17RR3 467 aa16.61■□□□□ 0.25
PTPRU-203ENST00000415600 OR4C16Q8NGL9 310 aa16.61■□□□□ 0.25
PTPRU-203ENST00000415600 ZNF714Q96N38 554 aa16.61■□□□□ 0.25
PTPRU-203ENST00000415600 ETAA1Q9NY74 926 aa16.61■□□□□ 0.25
PTPRU-203ENST00000415600 TRAV6A0A075B6T7 132 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 HMX3A6NHT5 357 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 C17orf98A8MV24 154 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 MFNGO00587 321 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 RSU1Q15404 277 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 LY6EQ16553 131 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 PLAC9Q5JTB6 97 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 SPIN3Q5JUX0 258 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 ZNF782Q6ZMW2 699 aaPredicted RBP16.6■□□□□ 0.25
PTPRU-203ENST00000415600 OR56B4Q8NH76 319 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 Q96M66 194 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 MCUBQ9NWR8 336 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 PITPNC1Q9UKF7 332 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 ZNF737O75373 536 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 HTR3BO95264 441 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 HAND1O96004 215 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 CSTBP04080 98 aaKnown RBP16.6■□□□□ 0.25
PTPRU-203ENST00000415600 ARG1P05089 322 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 H2AFB2P0C5Z0 115 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 GABRR1P24046 479 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 KIR2DS4P43632 304 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 CD300CQ08708 224 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 ARL6IP1Q15041 203 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 STEAP1BQ6NZ63 245 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 TRAPPC6BQ86SZ2 158 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 FAM58AQ8N1B3 248 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 C11orf42Q8N5U0 333 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 C17orf50Q8WW18 174 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 MALSU1Q96EH3 234 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 C20orf85Q9H1P6 137 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 PCDHB16Q9NRJ7 776 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 KCNK7Q9Y2U2 307 aa16.6■□□□□ 0.25
PTPRU-203ENST00000415600 IGKV1-12A0A0C4DH73 117 aa16.59■□□□□ 0.25
PTPRU-203ENST00000415600 IGKV1D-12P01611 117 aa16.59■□□□□ 0.25
PTPRU-203ENST00000415600 CD74P04233 296 aa16.59■□□□□ 0.25
PTPRU-203ENST00000415600 CD3DP04234 171 aa16.59■□□□□ 0.25
PTPRU-203ENST00000415600 GNG2P59768 71 aa16.59■□□□□ 0.25
PTPRU-203ENST00000415600 EDDM3AQ14507 147 aa16.59■□□□□ 0.25
PTPRU-203ENST00000415600 GRK1Q15835 563 aa16.59■□□□□ 0.25
PTPRU-203ENST00000415600 FAAP20Q6NZ36 180 aa16.59■□□□□ 0.25
PTPRU-203ENST00000415600 NUDCD2Q8WVJ2 157 aa16.59■□□□□ 0.25
PTPRU-203ENST00000415600 MRPS24Q96EL2 167 aaKnown RBP16.59■□□□□ 0.25
PTPRU-203ENST00000415600 ARHGAP5-AS1Q96IT6 56 aa16.59■□□□□ 0.25
PTPRU-203ENST00000415600 LINC00312Q9Y6C7 94 aa16.59■□□□□ 0.25
PTPRU-203ENST00000415600 C7orf66A4D0T2 115 aa16.58■□□□□ 0.24
PTPRU-203ENST00000415600 SSX5O60225 188 aa16.58■□□□□ 0.24
PTPRU-203ENST00000415600 KRTAP10-3P60369 221 aa16.58■□□□□ 0.24
PTPRU-203ENST00000415600 HERPUD1Q15011 391 aa16.58■□□□□ 0.24
PTPRU-203ENST00000415600 SAXO1Q8IYX7 474 aa16.58■□□□□ 0.24
PTPRU-203ENST00000415600 RHOFQ9HBH0 211 aa16.58■□□□□ 0.24
PTPRU-203ENST00000415600 ANAPC10Q9UM13 185 aa16.58■□□□□ 0.24
PTPRU-203ENST00000415600 ZNF736B4DX44 427 aaPredicted RBP16.57■□□□□ 0.24
PTPRU-203ENST00000415600 KCNAB3O43448 404 aa16.57■□□□□ 0.24
PTPRU-203ENST00000415600 CA11O75493 328 aa16.57■□□□□ 0.24
PTPRU-203ENST00000415600 NDUFB6O95139 128 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms