RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ZNF497Q6ZNH5 498 aa13.93□□□□□ -0.18
SCAMP4-204ENST00000414057 MRPL30Q8TCC3 161 aaKnown RBP13.93□□□□□ -0.18
SCAMP4-204ENST00000414057 DYRK2Q92630 601 aa13.93□□□□□ -0.18
SCAMP4-204ENST00000414057 ZNF48Q96MX3 618 aaPredicted RBP13.93□□□□□ -0.18
SCAMP4-204ENST00000414057 GINS4Q9BRT9 223 aa13.93□□□□□ -0.18
SCAMP4-204ENST00000414057 PPA2Q9H2U2 334 aa13.93□□□□□ -0.18
SCAMP4-204ENST00000414057 Q9N2K0 584 aa13.93□□□□□ -0.18
SCAMP4-204ENST00000414057 IGHV3OR16-10A0A075B7F0 116 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 HSPB6O14558 160 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 PEX14O75381 377 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 ECI1P42126 302 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 TSPAN5P62079 268 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 TATDN3Q17R31 274 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 SLC35E4Q6ICL7 350 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 ZNF561Q8N587 486 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 ZDHHC16Q969W1 377 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 SNX22Q96L94 193 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 SCGB3A2Q96PL1 93 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 DNTTIP1Q9H147 329 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 EHFQ9NZC4 300 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 KAAG1Q9UBP8 84 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 CTSZQ9UBR2 303 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 ZNF222Q9UK12 451 aa13.92□□□□□ -0.18
SCAMP4-204ENST00000414057 IGKV1D-17A0A075B6S4 117 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 TRAV6A0A075B6T7 132 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 TMEM30CPA0ZSE6 113 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 C22orf46C9J442 243 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 TNFRSF13BO14836 293 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 TMPRSS2O15393 492 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 TOX4O94842 621 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 DIRAS3O95661 229 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 CTXN2P0C2S0 81 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 COL10A1Q03692 680 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 METTL11BQ5VVY1 283 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 STUMQ69YW2 141 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 CD177Q8N6Q3 437 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 TERB2Q8NHR7 220 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 ANGPTL6Q8NI99 470 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 MAFIPQ8WZ33 124 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 SDSLQ96GA7 329 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 CYYR1Q96J86 154 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 DUX5Q96PT3 197 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 PCGF1Q9BSM1 259 aa13.91□□□□□ -0.18
SCAMP4-204ENST00000414057 TRDCB7Z8K6 153 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 PSPNO60542 156 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 GYPAP02724 150 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 IL13RA1P78552 427 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 SLC9A3R2Q15599 337 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 SCGB2B2Q4G0G5 96 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 SHISA2Q6UWI4 295 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 C17orf107Q6ZR85 190 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 SLC36A1Q7Z2H8 476 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 OR5D13Q8NGL4 314 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 CHAC2Q8WUX2 184 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 ZNF747Q9BV97 191 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 FAM234AQ9H0X4 552 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 ALX4Q9H161 411 aaPredicted RBP13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 NCOR1P1Q9H4R4 102 aa13.9□□□□□ -0.18
SCAMP4-204ENST00000414057 IGKV1D-8A0A087WSZ0 117 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 DVL1O14640 695 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 MGST3O14880 152 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 ARPC1BO15143 372 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 GPR37O15354 613 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 ZNF737O75373 536 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 OR5H8P0DN80 308 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 OR3A1P47881 315 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 CEBPDP49716 269 aaPredicted RBP13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 SURF2Q15527 256 aaPredicted RBP13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 ATPAF1Q5TC12 328 aaPredicted RBP13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 TRAT1Q6PIZ9 186 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 ZNF554Q86TJ5 538 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 LHFPL1Q86WI0 220 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 CADM3Q8N126 398 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 ASCC1Q8N9N2 400 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 OR4A4PQ8NGN8 299 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 OR6F1Q8NGZ6 308 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 PLPPR1Q8TBJ4 325 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 MED30Q96HR3 178 aa13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 MBNL3Q9NUK0 354 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-204ENST00000414057 TMEM82A0PJX8 343 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 C7orf66A4D0T2 115 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 NKX6-3A6NJ46 265 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 K7N7A8 449 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 FABP7O15540 132 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 PFDN1O60925 122 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 TRAPPC2P0DI81 140 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 TRAPPC2BP0DI82 140 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 GLP1RP43220 463 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 GABRA2P47869 451 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 HLA-DRB3P79483 266 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 HOXA4Q00056 320 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 ATXN7L3Q14CW9 347 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 DHRS11Q6UWP2 260 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 BRD3OSQ6XYD6 125 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 Q6ZPA2 131 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 OR13C8Q8NGS7 320 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 CCDC107Q8WV48 283 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 DMRTB1Q96MA1 342 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 PRDM13Q9H4Q3 707 aa13.88□□□□□ -0.19
SCAMP4-204ENST00000414057 TRAPPC2LQ9UL33 140 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms