RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ERGIC3Q9Y282 383 aa11.61□□□□□ -0.55
CBX3-203ENST00000409747 SLC31A2O15432 143 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 LANCL1O43813 399 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 PDCD6O75340 191 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 UBBP0CG47 229 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 RCC1P18754 421 aaPredicted RBP11.6□□□□□ -0.55
CBX3-203ENST00000409747 HOXD3P31249 432 aaPredicted RBP11.6□□□□□ -0.55
CBX3-203ENST00000409747 SOX6P35712 828 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 KRTAP10-11P60412 298 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 FOXE3Q13461 319 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 DEFB121Q5J5C9 76 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 OR1L1Q8NH94 360 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 TFAP2CQ92754 450 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 P2RX4Q99571 388 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 TAF9BQ9HBM6 251 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 OR2S2Q9NQN1 319 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 MBNL3Q9NUK0 354 aaKnown RBP11.6□□□□□ -0.55
CBX3-203ENST00000409747 JPT1Q9UK76 154 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 ELANEP08246 267 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 GNAO1P09471 354 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 VDAC1P21796 283 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 FAM53AQ6NSI3 398 aaPredicted RBP11.6□□□□□ -0.55
CBX3-203ENST00000409747 LYPD6Q86Y78 171 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 FAM71E2Q8N5Q1 922 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 NANOGP1Q8N7R0 232 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 BPIFB6Q8NFQ5 453 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 OR8U1Q8NH10 309 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 FBLIM1Q8WUP2 373 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 PLSCR3Q9NRY6 295 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 ZNF580Q9UK33 172 aa11.6□□□□□ -0.55
CBX3-203ENST00000409747 WI2-2373I1.2A0A1W2PRP0 233 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 UBE2QL1A1L167 161 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 LINC01548A6NM66 108 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 H0YHG0 523 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 RGS11O94810 467 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 OR5H8P0DN80 308 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 ZNF134P52741 427 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 LSAMPQ13449 338 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 MORN2Q502X0 79 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 C18orf65Q6ZTR6 163 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 MS4A15Q8N5U1 240 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 RNF152Q8N8N0 203 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 FAM46BQ96A09 425 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 ABHD14AQ9BUJ0 271 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 MND1Q9BWT6 205 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 LRRC42Q9Y546 428 aa11.59□□□□□ -0.55
CBX3-203ENST00000409747 ZNF736B4DX44 427 aaPredicted RBP11.58□□□□□ -0.56
CBX3-203ENST00000409747 CCL24O00175 119 aa11.58□□□□□ -0.56
CBX3-203ENST00000409747 RPLP1P05386 114 aaKnown RBP11.58□□□□□ -0.56
CBX3-203ENST00000409747 CDX1P47902 265 aaPredicted RBP11.58□□□□□ -0.56
CBX3-203ENST00000409747 HTD2P86397 168 aa11.58□□□□□ -0.56
CBX3-203ENST00000409747 OGFRL1Q5TC84 451 aaPredicted RBP11.58□□□□□ -0.56
CBX3-203ENST00000409747 MRPL30Q8TCC3 161 aaKnown RBP11.58□□□□□ -0.56
CBX3-203ENST00000409747 PHYHIPQ92561 330 aa11.58□□□□□ -0.56
CBX3-203ENST00000409747 NEDD4LQ96PU5 975 aa11.58□□□□□ -0.56
CBX3-203ENST00000409747 CHCHD6Q9BRQ6 235 aa11.58□□□□□ -0.56
CBX3-203ENST00000409747 DCLRE1BQ9H816 532 aa11.58□□□□□ -0.56
CBX3-203ENST00000409747 COL7A1Q02388 2944 aa11.58□□□□□ -0.56
CBX3-203ENST00000409747 CASQ2O14958 399 aaPredicted RBP11.57□□□□□ -0.56
CBX3-203ENST00000409747 IGF1P05019 195 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 RAB25P57735 213 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 MMDQ15546 238 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 NKAPLQ5M9Q1 402 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 VAX1Q5SQQ9 334 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 RNLSQ5VYX0 342 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 GLT8D1Q68CQ7 371 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 SIGIRRQ6IA17 410 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 LAIR2Q6ISS4 152 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 GALMQ96C23 342 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 RAX2Q96IS3 184 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 FKBP14Q9NWM8 211 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 ABRACLQ9P1F3 81 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 ZNF107Q9UII5 783 aaPredicted RBP11.57□□□□□ -0.56
CBX3-203ENST00000409747 YPEL1O60688 119 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 IGHG4P01861 327 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 VHLP40337 213 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 F2RL1P55085 397 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 DGCR2P98153 550 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 CFHR3Q02985 330 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 GABPB1Q06547 395 aaPredicted RBP11.57□□□□□ -0.56
CBX3-203ENST00000409747 KIR2DS1Q14954 304 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 ACSM3Q53FZ2 586 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 LY6G6FQ5SQ64 297 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 OR5M8Q8NGP6 311 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 YPEL2Q96QA6 119 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 HSPB9Q9BQS6 159 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 TMEM59Q9BXS4 323 aa11.57□□□□□ -0.56
CBX3-203ENST00000409747 RAMP3O60896 148 aa11.56□□□□□ -0.56
CBX3-203ENST00000409747 CDK1P06493 297 aa11.56□□□□□ -0.56
CBX3-203ENST00000409747 CHATP28329 748 aa11.56□□□□□ -0.56
CBX3-203ENST00000409747 CD69Q07108 199 aa11.56□□□□□ -0.56
CBX3-203ENST00000409747 GNMTQ14749 295 aa11.56□□□□□ -0.56
CBX3-203ENST00000409747 RBM48Q5RL73 367 aaKnown RBP11.56□□□□□ -0.56
CBX3-203ENST00000409747 C6orf141Q5SZD1 244 aa11.56□□□□□ -0.56
CBX3-203ENST00000409747 OR2AK2Q8NG84 335 aa11.56□□□□□ -0.56
CBX3-203ENST00000409747 OR52L2PQ8NGH6 319 aa11.56□□□□□ -0.56
CBX3-203ENST00000409747 KCNG3Q8TAE7 436 aa11.56□□□□□ -0.56
CBX3-203ENST00000409747 STEAP1Q9UHE8 339 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms