RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ANOS1P23352 680 aa9.65□□□□□ -0.86
SNX13-202ENST00000409604 OPCMLQ14982 345 aa9.65□□□□□ -0.86
SNX13-202ENST00000409604 RPUSD3Q6P087 351 aaKnown RBP9.65□□□□□ -0.86
SNX13-202ENST00000409604 LIN7CQ9NUP9 197 aaKnown RBP9.65□□□□□ -0.86
SNX13-202ENST00000409604 UBQLN2Q9UHD9 624 aa9.65□□□□□ -0.86
SNX13-202ENST00000409604 METRNQ9UJH8 293 aa9.65□□□□□ -0.86
SNX13-202ENST00000409604 MUC22E2RYF6 1773 aaPredicted RBP9.65□□□□□ -0.86
SNX13-202ENST00000409604 OOEPA6NGQ2 149 aa9.65□□□□□ -0.86
SNX13-202ENST00000409604 METTL15P1P0C7V9 234 aa9.65□□□□□ -0.86
SNX13-202ENST00000409604 OR2F1Q13607 317 aa9.65□□□□□ -0.86
SNX13-202ENST00000409604 RAB32Q13637 225 aa9.65□□□□□ -0.86
SNX13-202ENST00000409604 OR5M8Q8NGP6 311 aa9.65□□□□□ -0.86
SNX13-202ENST00000409604 Q96M66 194 aa9.65□□□□□ -0.86
SNX13-202ENST00000409604 NUPL2O15504 423 aaKnown RBP9.65□□□□□ -0.87
SNX13-202ENST00000409604 TUBG1P23258 451 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 PSMB6P28072 239 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 HLA-DRB3P79483 266 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 MMDQ15546 238 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 TNXAQ16473 311 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 THNSL2Q86YJ6 484 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 SPICQ8N5J4 248 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 ST6GALNAC3Q8NDV1 305 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 ZNF75AQ96N20 296 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 ZNF714Q96N38 554 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 GFI1Q99684 422 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 RASL12Q9NYN1 266 aa9.65□□□□□ -0.87
SNX13-202ENST00000409604 C9orf170A2RU37 121 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 CLEC18AA5D8T8 446 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 DKK1O94907 266 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 IGHV1-46P01743 117 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 PPP3CBP16298 524 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 GGNBP1Q5YKI7 109 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 FDX2Q6P4F2 183 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 Q71RC1 249 aaPredicted RBP9.64□□□□□ -0.87
SNX13-202ENST00000409604 PNKDQ8N490 385 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 CLEC18CQ8NCF0 446 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 LILRB4Q8NHJ6 448 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 RBMXL1Q96E39 390 aaKnown RBP9.64□□□□□ -0.87
SNX13-202ENST00000409604 MARS2Q96GW9 593 aaKnown RBP9.64□□□□□ -0.87
SNX13-202ENST00000409604 IGHV3-35A0A0C4DH35 117 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 MED6O75586 246 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 TSPAN15O95858 294 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 ARG1P05089 322 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 PTBP1P26599 531 aaKnown RBP eCLIP9.64□□□□□ -0.872e-13■■■■■ 28.1
SNX13-202ENST00000409604 CST9LP1Q5W188 147 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 OR13A1Q8NGR1 328 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 MISP3Q96FF7 219 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 TMUB1Q9BVT8 246 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 VSIG4Q9Y279 399 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 FAM24AA6NFZ4 105 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 DVL1O14640 695 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 OR5G3P0C626 314 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 OR8U8P0C7N1 319 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 SLC6A1P30531 599 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 RAB31Q13636 194 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 ASPHD2Q6ICH7 369 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 C1orf162Q8NEQ5 155 aaPredicted RBP9.64□□□□□ -0.87
SNX13-202ENST00000409604 PXT1Q8NFP0 134 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 SSUH2Q9Y2M2 353 aa9.64□□□□□ -0.87
SNX13-202ENST00000409604 TMEM14DPA8MWL7 114 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 RPL39P5Q59GN2 51 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 DKK4Q9UBT3 224 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 HAX1O00165 279 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 FPR2P25090 351 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 CHATP28329 748 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 SLC38A6Q8IZM9 456 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 HARBI1Q96MB7 349 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 TMEM68Q96MH6 324 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 CALYQ9NYX4 217 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 RCL1Q9Y2P8 373 aaKnown RBP9.63□□□□□ -0.87
SNX13-202ENST00000409604 OR2W1Q9Y3N9 320 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 V9GYS6 101 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 ERVH48-1M5A8F1 160 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 F2RL2O00254 374 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 ICMTO60725 284 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 PLA2G5P39877 138 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 GZMKP49863 264 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 KLF9Q13886 244 aaPredicted RBP9.63□□□□□ -0.87
SNX13-202ENST00000409604 LCN15Q6UWW0 184 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 WDR82Q6UXN9 313 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 ACP7Q6ZNF0 438 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 Q8NA96 180 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 RPS4Y2Q8TD47 263 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 CYYR1Q96J86 154 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 PSENENQ9NZ42 101 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 HIST2H2BCQ6DN03 193 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 ZNF485Q8NCK3 441 aa9.63□□□□□ -0.87
SNX13-202ENST00000409604 MS4A7Q9GZW8 240 aaPredicted RBP9.63□□□□□ -0.87
SNX13-202ENST00000409604 TIMM8BQ9Y5J9 83 aaPredicted RBP9.63□□□□□ -0.87
SNX13-202ENST00000409604 ZNF14P17017 642 aaPredicted RBP9.62□□□□□ -0.87
SNX13-202ENST00000409604 KITLGP21583 273 aa9.62□□□□□ -0.87
SNX13-202ENST00000409604 PRRX1P54821 245 aa9.62□□□□□ -0.87
SNX13-202ENST00000409604 SRPXP78539 464 aa9.62□□□□□ -0.87
SNX13-202ENST00000409604 CD276Q5ZPR3 534 aa9.62□□□□□ -0.87
SNX13-202ENST00000409604 PLPPR1Q8TBJ4 325 aa9.62□□□□□ -0.87
SNX13-202ENST00000409604 SLC25A31Q9H0C2 315 aa9.62□□□□□ -0.87
SNX13-202ENST00000409604 OR51I2Q9H344 312 aa9.62□□□□□ -0.87
SNX13-202ENST00000409604 NAA60Q9H7X0 242 aa9.62□□□□□ -0.87
SNX13-202ENST00000409604 SDHAF2Q9NX18 166 aa9.62□□□□□ -0.87
SNX13-202ENST00000409604 DOK5Q9P104 306 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms