RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 CCL17Q92583 94 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 SLC25A38Q96DW6 304 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 HARBI1Q96MB7 349 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 GPR61Q9BZJ8 451 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 PLA2G3Q9NZ20 509 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 TRBV5-7A0A0A0MS05 114 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 H3BVH4 76 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 NDUFB4O95168 129 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 NTN1O95631 604 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 NXPH1P58417 271 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 AESQ08117 197 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 GUSBP11Q6P575 273 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 OR5R1Q8NH85 324 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 HIST1H2BAQ96A08 127 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 TMEM45BQ96B21 275 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 ZNF665Q9H7R5 613 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 TREM2Q9NZC2 230 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 RNF7Q9UBF6 113 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 WIPI2Q9Y4P8 454 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 PXMP4Q9Y6I8 212 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 M0R3E3 92 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 DNASE2O00115 360 aaPredicted RBP11.3□□□□□ -0.6
RNF43-201ENST00000407977 LYZL6O75951 148 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 NUP214P35658 2090 aaPredicted RBP11.3□□□□□ -0.6
RNF43-201ENST00000407977 MPLP40238 635 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 RPS11P62280 158 aaKnown RBP eCLIP11.3□□□□□ -0.6
RNF43-201ENST00000407977 IBA57Q5T440 356 aaKnown RBP11.3□□□□□ -0.6
RNF43-201ENST00000407977 ZNF788Q6ZQV5 615 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 OR2Y1Q8NGV0 311 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 ASCL3Q9NQ33 180 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 DANCRP0C864 163 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 FAM27BQ5VT28 67 aa11.3□□□□□ -0.6
RNF43-201ENST00000407977 CDX2Q99626 313 aaPredicted RBP11.3□□□□□ -0.6
RNF43-201ENST00000407977 MAP1BP46821 2468 aaKnown RBP11.3□□□□□ -0.6
RNF43-201ENST00000407977 HOXD4P09016 255 aaPredicted RBP11.29□□□□□ -0.6
RNF43-201ENST00000407977 TEX30Q5JUR7 227 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 WDR74Q6RFH5 385 aaPredicted RBP11.29□□□□□ -0.6
RNF43-201ENST00000407977 UNQ9370/PRO34162Q6UXP9 181 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 SLC25A40Q8TBP6 338 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 TAF15Q92804 592 aaKnown RBP eCLIP11.29□□□□□ -0.64e-7■■■■□ 23.8
RNF43-201ENST00000407977 HYPMO75409 117 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 FOLR2P14207 255 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 GLIPR1P48060 266 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 NMUP48645 174 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 HINT1P49773 126 aaPredicted RBP11.29□□□□□ -0.6
RNF43-201ENST00000407977 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 OR11H4Q8NGC9 324 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 SF3B6Q9Y3B4 125 aaKnown RBP11.29□□□□□ -0.6
RNF43-201ENST00000407977 LEPROTL1O95214 131 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 KIR2DL1P43626 348 aaPredicted RBP11.29□□□□□ -0.6
RNF43-201ENST00000407977 KIR2DL2P43627 348 aaPredicted RBP11.29□□□□□ -0.6
RNF43-201ENST00000407977 SSX8Q7RTT4 187 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 KLHDC2Q9Y2U9 406 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 TNRC6CQ9HCJ0 1690 aaKnown RBP11.29□□□□□ -0.6
RNF43-201ENST00000407977 SHISA7A6NL88 538 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 CD8AP01732 235 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 COX7A1P24310 79 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 INO80CQ6PI98 192 aaPredicted RBP11.29□□□□□ -0.6
RNF43-201ENST00000407977 MARS2Q96GW9 593 aaKnown RBP11.29□□□□□ -0.6
RNF43-201ENST00000407977 CLN8Q9UBY8 286 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 HIGD1AQ9Y241 93 aa11.29□□□□□ -0.6
RNF43-201ENST00000407977 A0A1W2PR80 420 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 FGF12P61328 243 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 C16orf47Q6ZP98 133 aaPredicted RBP11.28□□□□□ -0.6
RNF43-201ENST00000407977 OR8G5Q8NG78 346 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 OR1K1Q8NGR3 316 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 CLEC5AQ9NY25 188 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 CARHSP1Q9Y2V2 147 aaKnown RBP11.28□□□□□ -0.6
RNF43-201ENST00000407977 C2CD4DB7Z1M9 353 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 AGAP20933 346 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 ZFP36L2P47974 494 aaKnown RBP11.28□□□□□ -0.6
RNF43-201ENST00000407977 LRRC75BQ2VPJ9 315 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 APCDD1LQ8NCL9 501 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 FZR1Q9UM11 496 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 OR51B2Q9Y5P1 312 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 RND3P61587 244 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 GAB4Q2WGN9 574 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 MRPL18Q9H0U6 180 aaKnown RBP11.28□□□□□ -0.6
RNF43-201ENST00000407977 KIAA1551Q9HCM1 1747 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 AMY1AP04745 511 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 PCP4P48539 62 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 H2BFSP57053 126 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 RBPMS2Q6ZRY4 209 aaKnown RBP11.28□□□□□ -0.6
RNF43-201ENST00000407977 GGACTQ9BVM4 153 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 AURKAIP1Q9NWT8 199 aaPredicted RBP11.28□□□□□ -0.6
RNF43-201ENST00000407977 RAB29O14966 203 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 CD74P04233 296 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 ZNF735P0CB33 412 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 EPHA8P29322 1005 aaPredicted RBP11.28□□□□□ -0.6
RNF43-201ENST00000407977 ZNF137PP52743 207 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 TMEM208Q9BTX3 173 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 SCNM1Q9BWG6 230 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 RAB1BQ9H0U4 201 aa11.28□□□□□ -0.6
RNF43-201ENST00000407977 RELBQ01201 579 aa11.27□□□□□ -0.6
RNF43-201ENST00000407977 TWIST1Q15672 202 aa11.27□□□□□ -0.6
RNF43-201ENST00000407977 HDHD3Q9BSH5 251 aaPredicted RBP11.27□□□□□ -0.6
RNF43-201ENST00000407977 HEXA-AS1Q9H8Q6 139 aa11.27□□□□□ -0.6
RNF43-201ENST00000407977 H0YL77 283 aa11.27□□□□□ -0.61
RNF43-201ENST00000407977 PPIHO43447 177 aaKnown RBP11.27□□□□□ -0.61
RNF43-201ENST00000407977 HOXA4Q00056 320 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms