RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 SNX29P2Q8IUI4 249 aa23.86■■□□□ 1.41
USP42-202ENST00000404008 OR4A4PQ8NGN8 299 aa23.86■■□□□ 1.41
USP42-202ENST00000404008 DIRAS2Q96HU8 199 aa23.86■■□□□ 1.41
USP42-202ENST00000404008 OR2S2Q9NQN1 319 aa23.86■■□□□ 1.41
USP42-202ENST00000404008 GNG12Q9UBI6 72 aa23.86■■□□□ 1.41
USP42-202ENST00000404008 JPT1Q9UK76 154 aa23.86■■□□□ 1.41
USP42-202ENST00000404008 PSG11Q9UQ72 335 aa23.86■■□□□ 1.41
USP42-202ENST00000404008 SETD2Q9BYW2 2564 aaPredicted RBP23.86■■□□□ 1.41
USP42-202ENST00000404008 IGKV1D-8A0A087WSZ0 117 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 MEIOCA2RUB1 952 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 FABP7O15540 132 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 IGLV1-47P01700 117 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 IGHV3-7P01780 117 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 TNFSF8P32971 234 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 GNMTQ14749 295 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 TUSC1Q2TAM9 212 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 STEAP3Q658P3 488 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 BEND2Q8NDZ0 799 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 OR52L2PQ8NGH6 319 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 OR9G1Q8NH87 305 aa23.85■■□□□ 1.41
USP42-202ENST00000404008 IGKV1-6A0A0C4DH72 117 aa23.84■■□□□ 1.41
USP42-202ENST00000404008 GSTT2P0CG29 244 aa23.84■■□□□ 1.41
USP42-202ENST00000404008 GSTT2BP0CG30 244 aa23.84■■□□□ 1.41
USP42-202ENST00000404008 CBX5P45973 191 aa23.84■■□□□ 1.41
USP42-202ENST00000404008 GVQW1Q8N7I0 195 aa23.84■■□□□ 1.41
USP42-202ENST00000404008 OR10V1Q8NGI7 309 aa23.84■■□□□ 1.41
USP42-202ENST00000404008 ZNF596Q8TC21 504 aa23.84■■□□□ 1.41
USP42-202ENST00000404008 A0A0U1RQK1 487 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 J3QR06 171 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 TOR1AO14656 332 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 GNG10P50151 68 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 PRRX1P54821 245 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 HERPUD1Q15011 391 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 Q3ZCU0 254 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 OR4P4Q8NGL7 312 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 AJUBAQ96IF1 538 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 ABHD1Q96SE0 405 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 SLC6A7Q99884 636 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 SCPEP1Q9HB40 452 aa23.83■■□□□ 1.41
USP42-202ENST00000404008 TBL2Q9Y4P3 447 aaKnown RBP23.83■■□□□ 1.41
USP42-202ENST00000404008 MEIS3P1A6NDR6 274 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 LPLP06858 475 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 S100A5P33763 92 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 PPP1CCP36873 323 aaKnown RBP23.82■■□□□ 1.4
USP42-202ENST00000404008 LGALS4P56470 323 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 CNPY1Q3B7I2 92 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 MORN2Q502X0 79 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 HOGA1Q86XE5 327 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 C8orf31Q8N9H6 132 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 GPX8Q8TED1 209 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 C15orf40Q8WUR7 153 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 CABLES2Q9BTV7 478 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 ZNRD1Q9P1U0 126 aa23.82■■□□□ 1.4
USP42-202ENST00000404008 YPEL1O60688 119 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 HLA-DRB5Q30154 266 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 IGSF11Q5DX21 431 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 LDLRAD2Q5SZI1 272 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 LHFPL4Q7Z7J7 247 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 ZNF439Q8NDP4 499 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 YPEL2Q96QA6 119 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 MMP28Q9H239 520 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 OR1A1Q9P1Q5 309 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 SLC23A1Q9UHI7 598 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 ANXA10Q9UJ72 324 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 ANAPC10Q9UM13 185 aa23.81■■□□□ 1.4
USP42-202ENST00000404008 DIRAS3O95661 229 aa23.8■■□□□ 1.4
USP42-202ENST00000404008 ZBTB25P24278 435 aa23.8■■□□□ 1.4
USP42-202ENST00000404008 DEFB112Q30KQ8 113 aa23.8■■□□□ 1.4
USP42-202ENST00000404008 LY6G6FQ5SQ64 297 aa23.8■■□□□ 1.4
USP42-202ENST00000404008 BEST4Q8NFU0 473 aa23.8■■□□□ 1.4
USP42-202ENST00000404008 C17orf50Q8WW18 174 aa23.8■■□□□ 1.4
USP42-202ENST00000404008 ZNF48Q96MX3 618 aaPredicted RBP23.8■■□□□ 1.4
USP42-202ENST00000404008 IFT46Q9NQC8 304 aa23.8■■□□□ 1.4
USP42-202ENST00000404008 RABL2AQ9UBK7 228 aaPredicted RBP23.8■■□□□ 1.4
USP42-202ENST00000404008 RABL2BQ9UNT1 228 aa23.8■■□□□ 1.4
USP42-202ENST00000404008 MDFIC2A0A1B0GVS7 189 aa23.79■■□□□ 1.4
USP42-202ENST00000404008 A0A1W2PPE3 182 aa23.79■■□□□ 1.4
USP42-202ENST00000404008 SULT1C2O00338 296 aa23.79■■□□□ 1.4
USP42-202ENST00000404008 RGS11O94810 467 aa23.79■■□□□ 1.4
USP42-202ENST00000404008 HTR1DP28221 377 aa23.79■■□□□ 1.4
USP42-202ENST00000404008 MINOS1Q5TGZ0 78 aa23.79■■□□□ 1.4
USP42-202ENST00000404008 LINC00311Q8N616 119 aa23.79■■□□□ 1.4
USP42-202ENST00000404008 SNAPC3Q92966 411 aa23.79■■□□□ 1.4
USP42-202ENST00000404008 SOSTQ9BQB4 213 aa23.79■■□□□ 1.4
USP42-202ENST00000404008 FAM96BQ9Y3D0 163 aa23.79■■□□□ 1.4
USP42-202ENST00000404008 MINOS1-NBL1R4GNA1 71 aa23.79■■□□□ 1.4
USP42-202ENST00000404008 BUB1B-PAK6H3BSN5 160 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 HSPA12AO43301 675 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 ZNF134P52741 427 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 IL18Q14116 193 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 PYHIN1Q6K0P9 492 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 SLC25A48Q6ZT89 311 aaKnown RBP23.78■■□□□ 1.4
USP42-202ENST00000404008 OR6Q1Q8NGQ2 317 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 TRBV6-7A0A0A0MS04 114 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 BET1O15155 118 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 SLC31A2O15432 143 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 FCER2P06734 321 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 FBP1P09467 338 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 CEACAM6P40199 344 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 CT45A1Q5HYN5 189 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms