RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ST6GALNAC6Q969X2 333 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 EAF1Q96JC9 268 aaPredicted RBP10.56□□□□□ -0.72
SDF4-203ENST00000403997 FAAP24Q9BTP7 215 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 TMEM59Q9BXS4 323 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 ISYNA1Q9NPH2 558 aa10.56□□□□□ -0.72
SDF4-203ENST00000403997 MBNL3Q9NUK0 354 aaKnown RBP10.56□□□□□ -0.72
SDF4-203ENST00000403997 TSSC4Q9Y5U2 329 aaPredicted RBP10.56□□□□□ -0.72
SDF4-203ENST00000403997 PSMB11A5LHX3 300 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 SLC22A1O15245 554 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 CPEP16870 476 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 CHATP28329 748 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 CD1BP29016 333 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 HSPA13P48723 471 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 RPS25P62851 125 aaKnown RBP10.55□□□□□ -0.72
SDF4-203ENST00000403997 RPS27AP62979 156 aaKnown RBP10.55□□□□□ -0.72
SDF4-203ENST00000403997 TRAM1Q15629 374 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 BEAN1Q3B7T3 259 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 MORN2Q502X0 79 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 OXLD1Q5BKU9 147 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 IZUMO2Q6UXV1 221 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 TMEM91Q6ZNR0 172 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 PRSS48Q7RTY5 328 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 C6orf201Q7Z4U5 140 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 C5orf24Q7Z6I8 188 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 ZNF329Q86UD4 541 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 TGIF2LXQ8IUE1 241 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 IZUMO1Q8IYV9 350 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 ZNF439Q8NDP4 499 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 OR52L2PQ8NGH6 319 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 MRPL30Q8TCC3 161 aaKnown RBP10.55□□□□□ -0.72
SDF4-203ENST00000403997 CNBD2Q96M20 576 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 NOL4LQ96MY1 436 aaPredicted RBP10.55□□□□□ -0.72
SDF4-203ENST00000403997 SULT4A1Q9BR01 284 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 KCNK15Q9H427 330 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 PLGRKTQ9HBL7 147 aa10.55□□□□□ -0.72
SDF4-203ENST00000403997 SERPINE3A8MV23 424 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 BPNT1O95861 308 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 MOSP00540 346 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 CD37P11049 281 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 CD33P20138 364 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 BLVRBP30043 206 aaPredicted RBP10.54□□□□□ -0.72
SDF4-203ENST00000403997 MAP2K4P45985 399 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 MLLT11Q13015 90 aaPredicted RBP10.54□□□□□ -0.72
SDF4-203ENST00000403997 UNC119Q13432 240 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 GNMTQ14749 295 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 P2RY14Q15391 338 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 STEAP3Q658P3 488 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 SLC35E3Q7Z769 313 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 ZNF554Q86TJ5 538 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 OR6M1Q8NGM8 313 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 CHPT1Q8WUD6 406 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 GALMQ96C23 342 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 MGLLQ99685 303 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 NICN1Q9BSH3 213 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 TM2D1Q9BX74 207 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 CHMP1AQ9HD42 196 aaPredicted RBP10.54□□□□□ -0.72
SDF4-203ENST00000403997 PLEKHJ1Q9NW61 149 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 LINC00527Q9UJ94 153 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 AK6Q9Y3D8 172 aaKnown RBP10.54□□□□□ -0.72
SDF4-203ENST00000403997 LRRC42Q9Y546 428 aa10.54□□□□□ -0.72
SDF4-203ENST00000403997 TMEM14DPA8MWL7 114 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 ZNF736B4DX44 427 aaPredicted RBP10.53□□□□□ -0.72
SDF4-203ENST00000403997 TXNL1O43396 289 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 ARL6IP5O75915 188 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 IGHG2P01859 326 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 PF4P02776 101 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 PRB2P02812 416 aaPredicted RBP10.53□□□□□ -0.72
SDF4-203ENST00000403997 ARSBP15848 533 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 PSMA1P25786 263 aaKnown RBP10.53□□□□□ -0.72
SDF4-203ENST00000403997 PPP1CCP36873 323 aaKnown RBP10.53□□□□□ -0.72
SDF4-203ENST00000403997 ZNF137PP52743 207 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 QRFPP83859 136 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 HTD2P86397 168 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 FOXRED2Q8IWF2 684 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 Q8N6K4 173 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 Q8N9W7 124 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 SETD6Q8TBK2 473 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 GFI1Q99684 422 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 URM1Q9BTM9 101 aaKnown RBP10.53□□□□□ -0.72
SDF4-203ENST00000403997 ABRACLQ9P1F3 81 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 JPT1Q9UK76 154 aa10.53□□□□□ -0.72
SDF4-203ENST00000403997 LINC01548A6NM66 108 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 SLC17A2O00624 439 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 SOCS1O15524 211 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 LANCL1O43813 399 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 YPEL1O60688 119 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 RGS11O94810 467 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 CALRP27797 417 aaKnown RBP10.52□□□□□ -0.73
SDF4-203ENST00000403997 SLC35B1P78383 322 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 FABP5Q01469 135 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 RAB11BQ15907 218 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 KPRPQ5T749 579 aaPredicted RBP10.52□□□□□ -0.73
SDF4-203ENST00000403997 OR2W3Q7Z3T1 314 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 WFDC9Q8NEX5 89 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 IL1F10Q8WWZ1 152 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 RBMXL1Q96E39 390 aaKnown RBP10.52□□□□□ -0.73
SDF4-203ENST00000403997 YPEL2Q96QA6 119 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 RASL11BQ9BPW5 248 aa10.52□□□□□ -0.73
SDF4-203ENST00000403997 ABHD14AQ9BUJ0 271 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms