RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 RPRMQ9NS64 109 aa10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 LYRM2Q9NU23 88 aaPredicted RBP10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 ATP23Q9Y6H3 246 aa10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 CLEC18AA5D8T8 446 aa10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 WNT9BO14905 357 aa10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 HOXC12P31275 282 aa10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 MPLP40238 635 aa10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 NKX6-1P78426 367 aaPredicted RBP10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 TRA2AQ13595 282 aaKnown RBP eCLIP10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 C10orf91Q5T1B1 145 aa10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 RIPPLY2Q5TAB7 128 aa10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 CLEC18CQ8NCF0 446 aa10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 LILRB1Q8NHL6 650 aaPredicted RBP10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 UNKLQ9H9P5 680 aaKnown RBP10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 MSL2Q9HCI7 577 aa10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 KCNIP1Q9NZI2 227 aa10.8□□□□□ -0.68
PPP4R1-202ENST00000400555 ZNF318Q5VUA4 2279 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 MED13LQ71F56 2210 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 K7N7A8 449 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 NTN3O00634 580 aaPredicted RBP10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 NEURL1O76050 574 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 G6PCP35575 357 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 AESQ08117 197 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 TMEM42Q69YG0 159 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 FOXL2NBQ6ZUU3 175 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 MRGPRDQ8TDS7 321 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 ZNF391Q9UJN7 358 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 SPTAN1Q13813 2472 aaKnown RBP10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 PQLC2LA1A4F0 135 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 KIAA1324LA8MWY0 1029 aaPredicted RBP10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 SYNGR2O43760 224 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 TRGC2P03986 189 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 BAXQ07812 192 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 FOXO1Q12778 655 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 FAM185AQ8N0U4 392 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 CLN8Q9UBY8 286 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 GAB2Q9UQC2 676 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 TRAV24A0A0B4J272 114 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 AP4M1O00189 453 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 CD55P08174 381 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 HNF1AP20823 631 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 PMELP40967 661 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 CD200P41217 278 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 ABLIM2Q6H8Q1 611 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 DEFB123Q8N688 67 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 TVP23CQ96ET8 276 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 PFDN5Q99471 154 aa10.79□□□□□ -0.68
PPP4R1-202ENST00000400555 TECTAO75443 2155 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 RAC2P15153 192 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 ARR3P36575 388 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 LHX2P50458 406 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 WDR25Q64LD2 544 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 TAAR9Q96RI9 348 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 ATP5SQ99766 215 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 PRDM14Q9GZV8 571 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 DNPH1O43598 174 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 PITX3O75364 302 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 CLN5O75503 358 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 SCAF4O95104 1147 aaKnown RBP10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 CTXN2P0C2S0 81 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 UBE2G2P60604 165 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 OR52L2PQ8NGH6 319 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 OR5A2Q8NGI9 324 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 OR2D2Q9H210 308 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 ZNF703Q9H7S9 590 aaPredicted RBP10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 C9orf172C9J069 976 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 OR2H2O95918 312 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 GFRA1P56159 465 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 OR8G1Q15617 311 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 COMMD1Q8N668 190 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 OR1L1Q8NH94 360 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 MRPL30Q8TCC3 161 aaKnown RBP10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 TRIB1Q96RU8 372 aa10.78□□□□□ -0.68
PPP4R1-202ENST00000400555 WNT5AP41221 380 aa10.77□□□□□ -0.68
PPP4R1-202ENST00000400555 UCP3P55916 312 aa10.77□□□□□ -0.68
PPP4R1-202ENST00000400555 CLDN18P56856 261 aa10.77□□□□□ -0.68
PPP4R1-202ENST00000400555 EIF3IQ13347 325 aaKnown RBP10.77□□□□□ -0.68
PPP4R1-202ENST00000400555 GFI1BQ5VTD9 330 aa10.77□□□□□ -0.68
PPP4R1-202ENST00000400555 PLPPR1Q8TBJ4 325 aa10.77□□□□□ -0.68
PPP4R1-202ENST00000400555 ARFGEF3Q5TH69 2177 aa10.77□□□□□ -0.68
PPP4R1-202ENST00000400555 YKT6O15498 198 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 DFFBO76075 338 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 CXCL1P09341 107 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 HLA-DRB3P79483 266 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 MRPL49Q13405 166 aaKnown RBP10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 TBC1D28Q2M2D7 210 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 PRAMEF6Q5VXH4 476 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 ZNF709Q8N972 641 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 ABHD14BQ96IU4 210 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 TOLLIPQ9H0E2 274 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 PRO1933Q9H354 126 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 HEXAP06865 529 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 FABP4P15090 132 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 CD46P15529 392 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 EGR1P18146 543 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 EIF2S3P41091 472 aaKnown RBP10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 CST9LP1Q5W188 147 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 UBALD2Q8IYN6 164 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 SLC25A40Q8TBP6 338 aa10.77□□□□□ -0.69
PPP4R1-202ENST00000400555 OR4C12Q96R67 309 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms