RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ZNF429Q86V71 674 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 GPR148Q8TDV2 347 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 DLX4Q92988 240 aaPredicted RBP9.23□□□□□ -0.93
LINC00544-201ENST00000400540 ORC6Q9Y5N6 252 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 GMPPBQ9Y5P6 360 aa9.23□□□□□ -0.93
LINC00544-201ENST00000400540 LCE6AA0A183 80 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 FADS2O95864 444 aaKnown RBP9.22□□□□□ -0.93
LINC00544-201ENST00000400540 CD2P06729 351 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 LYL1P12980 280 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 GP9P14770 177 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 RCC1P18754 421 aaPredicted RBP9.22□□□□□ -0.93
LINC00544-201ENST00000400540 BLVRBP30043 206 aaPredicted RBP9.22□□□□□ -0.93
LINC00544-201ENST00000400540 BDKRB2P30411 391 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 RAB9AP51151 201 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 ALDH3A2P51648 485 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 ACTBP60709 375 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 NDPQ00604 133 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 GABPB1Q06547 395 aaPredicted RBP9.22□□□□□ -0.93
LINC00544-201ENST00000400540 RAB40BQ12829 278 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 MRPL28Q13084 256 aaKnown RBP9.22□□□□□ -0.93
LINC00544-201ENST00000400540 HAPLN4Q86UW8 402 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 ODF3L1Q8IXM7 274 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 S100A13Q99584 98 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 ZNF184Q99676 751 aaPredicted RBP9.22□□□□□ -0.93
LINC00544-201ENST00000400540 MRPL20Q9BYC9 149 aaKnown RBP9.22□□□□□ -0.93
LINC00544-201ENST00000400540 ANKRD60Q9BZ19 345 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 OR51J1Q9H342 316 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 TMEM138Q9NPI0 162 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 ETAA1Q9NY74 926 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 RCC2Q9P258 522 aaKnown RBP9.22□□□□□ -0.93
LINC00544-201ENST00000400540 TRAPPC2LQ9UL33 140 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 FBXO7Q9Y3I1 522 aa9.22□□□□□ -0.93
LINC00544-201ENST00000400540 IGHV4OR15-8A0A075B7B6 117 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 A0A087WW49 117 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 TRAV41A0A0B4J266 112 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 FAM90A10PA6NDY2 464 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 SPINT2O43291 252 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 LANCL1O43813 399 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 SOX15O60248 233 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 HLA-DRB1P01911 266 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 GTF2F2P13984 249 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 PPP3R1P63098 170 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 SRSF7Q16629 238 aaKnown RBP eCLIP9.21□□□□□ -0.94
LINC00544-201ENST00000400540 ECSCRQ19T08 205 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 OR2G6Q5TZ20 316 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 STX19Q8N4C7 294 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 CBR4Q8N4T8 237 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 OR52L2PQ8NGH6 319 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 RHOXF1Q8NHV9 184 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 APH1BQ8WW43 257 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 ARPC1AQ92747 370 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 MYCBPQ99417 103 aaPredicted RBP9.21□□□□□ -0.94
LINC00544-201ENST00000400540 PALMDQ9NP74 551 aa9.21□□□□□ -0.94
LINC00544-201ENST00000400540 TRAV8-7A0A075B6U6 113 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 A0A1W2PN81 502 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 MCRIP1C9JLW8 97 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 H3BNX3 289 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 NBR2O15453 112 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 LALBAP00709 142 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 IGFBP3P17936 291 aaPredicted RBP9.2□□□□□ -0.94
LINC00544-201ENST00000400540 CHRNA7P36544 502 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 PPP1CCP36873 323 aaKnown RBP9.2□□□□□ -0.94
LINC00544-201ENST00000400540 OR3A3P47888 321 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 ETV1P50549 477 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 RIPK1Q13546 671 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 SMN1Q16637 294 aaKnown RBP9.2□□□□□ -0.94
LINC00544-201ENST00000400540 MORN2Q502X0 79 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 C6orf183Q5T699 404 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 RAB12Q6IQ22 244 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 RPL22L1Q6P5R6 122 aaKnown RBP9.2□□□□□ -0.94
LINC00544-201ENST00000400540 GAPTQ8N292 157 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 MINDY2Q8NBR6 621 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 MUL1Q969V5 352 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 NABP2Q9BQ15 211 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 ZNF251Q9BRH9 671 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 CHCHD6Q9BRQ6 235 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 ABHD14AQ9BUJ0 271 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 BANF2Q9H503 90 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 ZMAT4Q9H898 229 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 TAF9BQ9HBM6 251 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 OR2S2Q9NQN1 319 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 TPSG1Q9NRR2 321 aa9.2□□□□□ -0.94
LINC00544-201ENST00000400540 PAK1IP1Q9NWT1 392 aaPredicted RBP9.2□□□□□ -0.94
LINC00544-201ENST00000400540 UBE2QL1A1L167 161 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 LINC01619G3V211 115 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 ZNF780AO75290 641 aaPredicted RBP9.19□□□□□ -0.94
LINC00544-201ENST00000400540 LGALS1P09382 135 aaKnown RBP9.19□□□□□ -0.94
LINC00544-201ENST00000400540 SNRPBP14678 240 aaKnown RBP9.19□□□□□ -0.94
LINC00544-201ENST00000400540 C5orf64Q2M2E5 130 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 TMEM30BQ3MIR4 351 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 C19orf54Q5BKX5 351 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 ACSM6Q6P461 480 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 GLIPR1L1Q6UWM5 242 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 ADAMTSL5Q6ZMM2 481 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 Q96MT0 163 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 CITED4Q96RK1 184 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 TM2D3Q9BRN9 247 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 TOLLIPQ9H0E2 274 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 SPACA1Q9HBV2 294 aa9.19□□□□□ -0.94
LINC00544-201ENST00000400540 MRPS18AQ9NVS2 196 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms