RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 GAFA1Q96PS6 74 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 ZNF2Q9BSG1 426 aaPredicted RBP9.72□□□□□ -0.85
SKA3-203ENST00000400018 NKX6-2Q9C056 277 aaPredicted RBP9.72□□□□□ -0.85
SKA3-203ENST00000400018 C20orf85Q9H1P6 137 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 RCC2Q9P258 522 aaKnown RBP9.72□□□□□ -0.85
SKA3-203ENST00000400018 OOEPA6NGQ2 149 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 ZNF737O75373 536 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 KNG1P01042 644 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 VSIG10L2P0DP72 767 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 DAOP14920 347 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 FAM74A1Q5RGS3 127 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 OR51J1Q9H342 316 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 DLL4Q9NR61 685 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 ANXA10Q9UJ72 324 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 SETXQ7Z333 2677 aaKnown RBP9.72□□□□□ -0.85
SKA3-203ENST00000400018 PDZD2O15018 2839 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 PPIAL4EA0A075B759 164 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 IGKV1D-13A0A0B4J2D9 117 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 MPTX1A8MV57 137 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 PPIAL4DF5H284 164 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 DHFRP00374 187 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 PPIAL4FP0DN26 164 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 IGKV1-13P0DP09 117 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 SPP1P10451 314 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 AKR1C4P17516 323 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 TNFRSF1AP19438 455 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 EFNB3Q15768 340 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 HOGA1Q86XE5 327 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 OR5H2Q8NGV7 314 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 PPIAL4AQ9Y536 164 aa9.71□□□□□ -0.85
SKA3-203ENST00000400018 SERPINE3A8MV23 424 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 VSTM5A8MXK1 200 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 OR5H8P0DN80 308 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 TUBG1P23258 451 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 FCGR2CP31995 323 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 TAS2R19P59542 299 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 BTG1P62324 171 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 PHLDA2Q53GA4 152 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 OCSTAMPQ9BR26 566 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 EGLN1Q9GZT9 426 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 TAF9BQ9HBM6 251 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 TUBG2Q9NRH3 451 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 C19orf12Q9NSK7 152 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 ITPR3Q14573 2671 aa9.71□□□□□ -0.86
SKA3-203ENST00000400018 G3V3Q6 166 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 NAPSAO96009 420 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 CSF1P09603 554 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 H2AFB1P0C5Y9 115 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 H2AFB2P0C5Z0 115 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 PTBP1P26599 531 aaKnown RBP eCLIP9.7□□□□□ -0.86
SKA3-203ENST00000400018 PPP1CCP36873 323 aaKnown RBP9.7□□□□□ -0.86
SKA3-203ENST00000400018 GATA4P43694 442 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 C2orf68Q2NKX9 166 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 MPV17LQ2QL34 196 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 SP6Q3SY56 376 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 STUMQ69YW2 141 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 C12orf45Q8N5I9 185 aaPredicted RBP9.7□□□□□ -0.86
SKA3-203ENST00000400018 DNTTIP1Q9H147 329 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 Q9N2K0 584 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 MBD2Q9UBB5 411 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 HSF4Q9ULV5 492 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 C12orf77C9JDV5 145 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 IGHV2-70P01814 119 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 TK1P04183 234 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 IFNA6P05013 189 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 S100A9P06702 114 aaKnown RBP9.7□□□□□ -0.86
SKA3-203ENST00000400018 ACTBP60709 375 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 ACTG1P63261 375 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 AADACL3Q5VUY0 350 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 TCF23Q7RTU1 214 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 STX12Q86Y82 276 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 OR5AP2Q8NGF4 316 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 CASTOR1Q8WTX7 329 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 NARS2Q96I59 477 aaKnown RBP9.7□□□□□ -0.86
SKA3-203ENST00000400018 MED9Q9NWA0 146 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 DSCAML1Q8TD84 2053 aa9.7□□□□□ -0.86
SKA3-203ENST00000400018 A0A0A6YYH2 397 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 A0A1B0GV90 55 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 A0A1W2PRD5 423 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 A0A1W2PRF3 423 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 A0A1W2PRM7 423 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 C7orf66A4D0T2 115 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 A6NJ64 397 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 IGHV4-39P01824 125 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 COX6B1P14854 86 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 PGAM2P15259 253 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 AADACP22760 399 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 IL2RGP31785 369 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 CD276Q5ZPR3 534 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 ZNF497Q6ZNH5 498 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 C1orf174Q8IYL3 243 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 TMEM229BQ8NBD8 167 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 SECTM1Q8WVN6 248 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 OR51M1Q9H341 326 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 DPAGT1Q9H3H5 408 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 NOP16Q9Y3C1 178 aaKnown RBP9.69□□□□□ -0.86
SKA3-203ENST00000400018 NPTNQ9Y639 398 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 FLNAP21333 2647 aaKnown RBP9.69□□□□□ -0.86
SKA3-203ENST00000400018 DVL1O14640 695 aa9.69□□□□□ -0.86
SKA3-203ENST00000400018 LY86O95711 162 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms